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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
109
target gene predictions
95
accessible chromatin
75
chromatin state
74
candidate regulatory elements
29
gene expression
23
eQTL
14
differential activity
12
binding sites
8
variant allelic effects
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
198
September, 2022
February, 2021
58
November, 2021
24
June, 2020
19
February, 2024
18
May, 2021
17
September, 2023
13
October, 2022
11
August, 2021
10
January, 2020
May, 2020
10
May, 2024
9
February, 2020
9
January, 2022
9
March, 2020
8
August, 2017
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
312
bed bed3+
67
bed bed9
58
bigWig
45
tsv
2
bigBed bed9
1
bigBed narrowPeak
1
txt
Organism
449
Homo sapiens
Biosample type
274
primary cell
80
tissue
54
cell line
40
in vitro differentiated cells
1
stem cell
Organ
748
epithelium
445
kidney
349
connective tissue
337
brain
278
musculature of body
241
lung
240
pancreas
218
intestine
205
vasculature
198
heart
176
limb
162
embryo
157
blood vessel
144
bodily fluid
137
blood
136
skin of body
129
liver
128
large intestine
113
extraembryonic component
90
eye
90
stomach
73
uterus
66
small intestine
63
adipose tissue
59
adrenal gland
59
mammary gland
55
artery
55
placenta
52
bone element
49
prostate gland
43
ureter
38
gonad
37
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
19
lymphatic vessel
19
lymphoid tissue
19
nerve
19
ovary
19
thyroid gland
18
testis
15
mouth
14
vein
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
tongue
8
vagina
7
bone marrow
4
nose
1
pericardium
1
trachea
Project
365
AMP
58
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
394
hg19
166
GRCh38
2
hg18
month_released!
February, 2021
May, 2020
BIOSAMPLE
TYPE
449 results
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Clear Filters
target gene predictions
accessible chromatin
chromatin state
candidate regulatory elements
gene expression
eQTL
differential activity
binding sites
variant allelic effects
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
3
2
1
6
pericyte cell
10
10
1
3
fibroblast of lung
4
4
3
2
keratinocyte
5
2
3
2
1
fibroblast of cardiac tissue
4
2
3
3
+ See 48 more…
tissue
adipose tissue
8
2
6
6
4
omental fat pad
2
2
2
2
2
2
3
subcutaneous adipose tissue
2
1
2
5
1
3
lower leg skin
2
2
2
skin of body
1
1
1
3
+ See 8 more…
cell line
GM23248
1
1
1
1
RPMI7951
1
1
1
1
iPS DF 19.11
2
1
1
COLO829
1
1
1
HT1080
1
1
1
+ See 15 more…
in vitro differentiated cells
adipocyte
6
4
6
2
mesenchymal stem cell
3
1
2
2
chondrocyte
5
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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