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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
129
gene expression
96
target gene predictions
94
chromatin state
91
candidate regulatory elements
70
accessible chromatin
60
differential activity
12
eQTL
10
binding sites
7
histone modifications
3
Fine-mapped variants
1
caQTL
1
variant allelic effects
Date released
271
September, 2022
February, 2021
140
September, 2023
38
August, 2021
30
February, 2024
May, 2020
20
June, 2020
17
January, 2020
13
March, 2020
11
February, 2020
8
November, 2021
4
March, 2023
3
August, 2017
3
May, 2021
3
October, 2022
2
January, 2022
2
March, 2024
2
May, 2022
2
May, 2024
1
April, 2019
1
July, 2020
1
May, 2019
1
November, 2019
1
September, 2018
Available data
279
bed bed3+
182
tsv
91
bed bed9
55
bigWig
12
txt
3
bigBed bed9
3
csv
1
bam
Organism
574
Homo sapiens
Biosample type
265
primary cell
252
tissue
50
cell line
7
in vitro differentiated cells
Organ
748
epithelium
445
kidney
349
connective tissue
337
brain
278
musculature of body
241
lung
240
pancreas
218
intestine
205
vasculature
198
heart
176
limb
162
embryo
157
blood vessel
144
bodily fluid
137
blood
136
skin of body
129
liver
128
large intestine
113
extraembryonic component
90
eye
90
stomach
73
uterus
66
small intestine
63
adipose tissue
59
adrenal gland
59
mammary gland
55
artery
55
placenta
52
bone element
49
prostate gland
43
ureter
38
gonad
37
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
19
lymphatic vessel
19
lymphoid tissue
19
nerve
19
ovary
19
thyroid gland
18
testis
15
mouth
14
vein
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
tongue
8
vagina
7
bone marrow
4
nose
1
pericardium
1
trachea
Project
426
AMP
140
KPMP
8
ENCODE
Genome assembly (visualization)
380
hg19
163
GRCh38
2
hg18
month_released!
February, 2021
May, 2020
BIOSAMPLE
TYPE
574 results
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Clear Filters
gene expression
target gene predictions
chromatin state
candidate regulatory elements
accessible chromatin
differential activity
eQTL
binding sites
histone modifications
Fine-mapped variants
caQTL
variant allelic effects
primary cell
hepatocyte
10
3
1
2
8
3
1
endothelial cell of hepatic sinusoid
4
6
6
kidney tubule cell
1
2
2
2
2
epithelial cell of proximal tubule
2
1
1
1
1
1
glomerular endothelial cell
2
1
1
1
2
+ See 53 more…
tissue
kidney
14
16
14
10
1
liver
1
10
9
7
4
1
7
1
right kidney
10
10
10
renal pelvis
9
9
9
2
renal cortex interstitium
9
9
9
1
+ See 14 more…
cell line
HepG2
3
2
1
1
2
4
HEK293
1
1
1
1
1
ACHN
1
1
1
1
Caki2
1
1
1
1
HuH-7
1
1
1
1
+ See 9 more…
in vitro differentiated cells
hepatocyte
1
1
1
hepatocyte(AFP)
3
renal cell carcinoma
1
See all biosamples
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