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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
17
accessible chromatin
16
target gene predictions
15
eQTL
8
gene expression
6
Fine-mapped variants
5
chromatin state
3
variant allelic effects
2
differential activity
1
binding sites
1
candidate regulatory elements
Date released
September, 2022
February, 2021
9
March, 2020
8
June, 2020
8
May, 2021
6
August, 2021
6
January, 2022
6
November, 2021
5
August, 2017
5
February, 2020
5
February, 2024
4
January, 2020
3
March, 2024
3
May, 2020
2
September, 2018
1
January, 2018
1
November, 2022
1
October, 2022
Available data
45
bed bed3+
17
tsv
8
bigWig
1
bigBed bed9
Organism
74
Homo sapiens
Biosample type
56
tissue
10
cell line
7
primary cell
1
in vitro differentiated cells
Organ
612
epithelium
239
connective tissue
239
kidney
202
pancreas
176
brain
145
vasculature
108
blood vessel
101
heart
86
liver
81
embryo
79
musculature of body
69
bodily fluid
68
blood
65
eye
61
uterus
54
intestine
48
limb
42
adipose tissue
39
artery
34
skin of body
31
lung
30
large intestine
21
stomach
17
adrenal gland
17
mammary gland
14
esophagus
14
extraembryonic component
14
gonad
13
lymphatic vessel
13
nerve
12
pituitary gland
11
bone element
11
lymph node
10
prostate gland
10
spinal cord
10
vein
9
small intestine
7
ovary
7
placenta
7
thyroid gland
7
ureter
6
penis
6
spleen
6
testis
5
bone marrow
5
bronchus
5
thymus
4
breast
4
lymphoid tissue
3
mouth
3
urinary bladder
2
tongue
2
vagina
1
nose
1
pericardium
1
trachea
Project
68
AMP
6
ENCODE
Genome assembly (visualization)
56
hg19
26
GRCh38
2
hg18
month_released!
February, 2021
September, 2022
BIOSAMPLE
TYPE
74 results
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Clear Filters
accessible chromatin
target gene predictions
eQTL
gene expression
Fine-mapped variants
chromatin state
variant allelic effects
differential activity
binding sites
candidate regulatory elements
tissue
subcutaneous adipose tissue
2
5
2
3
1
1
1
adipose tissue
2
2
4
1
omental fat pad
2
2
2
3
large intestine
1
1
1
sigmoid colon
1
2
+ See 13 more…
cell line
HCT-116 cell
1
1
1
HCT116
2
HT-29
1
1
RKO
1
SW480
1
+ See 1 more…
primary cell
colon epithelial cell
3
3
mesenchymal stem cell of adipose
1
in vitro differentiated cells
white adipose cell
1
See all biosamples
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