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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
308
accessible chromatin
211
target gene predictions
118
chromatin state
99
candidate regulatory elements
98
gene expression
65
variant allelic effects
39
differential activity
29
eQTL
22
binding sites
15
Fine-mapped variants
6
caQTL
4
histone modifications
2
pQTL
Date released
February, 2021
304
September, 2022
September, 2023
177
November, 2021
97
February, 2024
52
May, 2021
46
June, 2020
45
March, 2023
35
August, 2021
33
May, 2020
32
January, 2020
26
March, 2020
22
February, 2020
22
January, 2021
22
November, 2022
18
October, 2022
16
February, 2023
10
April, 2020
10
August, 2017
9
January, 2022
9
October, 2019
7
August, 2018
5
May, 2022
4
November, 2019
3
March, 2024
3
November, 2020
2
May, 2024
2
September, 2018
1
January, 2018
1
July, 2020
1
June, 2021
1
May, 2019
Available data
724
bed bed3+
236
bigWig
129
tsv
108
bed bed9
13
txt
12
bigBed narrowPeak
10
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1016
Homo sapiens
Biosample type
722
primary cell
192
tissue
57
in vitro differentiated cells
44
cell line
1
stem cell
Organ
598
epithelium
353
brain
334
connective tissue
324
kidney
283
musculature of body
246
pancreas
241
lung
218
intestine
207
heart
186
limb
182
vasculature
162
embryo
148
blood vessel
144
bodily fluid
137
blood
136
skin of body
130
liver
128
large intestine
113
extraembryonic component
92
eye
90
stomach
73
uterus
66
adipose tissue
66
small intestine
59
adrenal gland
59
mammary gland
55
artery
55
placenta
53
bone element
49
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
22
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
testis
16
vein
15
mouth
12
pituitary gland
11
bronchus
11
lymphatic vessel
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
799
AMP
177
ENCODE
22
T1D
10
LungMap
4
ITG
4
community
Genome assembly (visualization)
860
hg19
397
GRCh38
2
hg18
month_released!
February, 2021
September, 2023
BIOSAMPLE
TYPE
1016 results
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Clear Filters
accessible chromatin
target gene predictions
chromatin state
candidate regulatory elements
gene expression
variant allelic effects
differential activity
eQTL
binding sites
Fine-mapped variants
caQTL
histone modifications
pQTL
primary cell
endothelial cell
15
7
5
2
1
2
fibroblast
16
4
6
2
1
hepatocyte
8
3
1
1
10
2
3
pericyte cell
10
10
1
1
pancreatic beta cell
8
2
3
1
3
+ See 145 more…
tissue
adipose tissue
2
8
6
6
1
4
coronary artery
3
3
3
2
1
2
2
3
1
pigmented layer of retina
20
tibial artery
3
2
3
2
1
2
2
3
omental fat pad
2
2
2
2
2
2
3
+ See 29 more…
in vitro differentiated cells
adipocyte
4
6
6
2
mesenchymal stem cell
1
3
2
2
retinal pigment epithelial cell
6
chondrocyte
5
hepatocyte
1
1
1
+ See 13 more…
cell line
EndoC_BH1
8
1
8
1
3
GM23248
1
1
1
1
HT1080
1
1
1
colon epithelial cell
1
1
1
foreskin fibroblast
1
1
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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