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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1271target gene predictions
  • 916chromatin state
  • 890accessible chromatin
  • 845candidate regulatory elements
  • 502gene expression
  • 186eQTL
  • 172differential activity
  • 140variant allelic effects
  • 137histone modifications
  • 98binding sites
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
Date released
  • 2639February, 2025
  • February, 2021
  • 2430September, 2022
  • 382May, 2021
  • 331November, 2021
  • 327February, 2024
  • 286September, 2023
  • 279June, 2020
  • 155May, 2020
  • 127March, 2020
  • 120August, 2021
  • 106January, 2022
  • 100October, 2022
  • 89January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 34August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 3547bed bed3+
  • 3388tsv
  • 842bed bed9
  • 530bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 25txt
  • 13bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 7868Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2418EpiMap
  • 501AMP
  • 476DGA
  • 415T1D
  • 403T2DKP
  • 281KPMP
  • 280ChIP-Atlas
  • 219BLUEPRINT
  • 152 T2DKP
  • 149GTEx
  • 127ENCODE
  • 1234DN
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4658tissue
  • 2044primary cell
  • 949cell line
  • 260in vitro differentiated cells
  • 3stem cell
Organ
  • 2864vasculature
  • 2812blood vessel
  • 2785bodily fluid
  • 2778blood
  • 2651vein
  • 762epithelium
  • 464kidney
  • 371connective tissue
  • 357brain
  • 288musculature of body
  • 246pancreas
  • 241lung
  • 218intestine
  • 209heart
  • 186limb
  • embryo
  • 137liver
  • 136skin of body
  • 128large intestine
  • 113extraembryonic component
  • 92eye
  • 90stomach
  • 76adipose tissue
  • 73uterus
  • 66small intestine
  • 64artery
  • 59adrenal gland
  • 59mammary gland
  • 55placenta
  • 53bone element
  • 49prostate gland
  • 46ureter
  • 38gonad
  • 38thymus
  • 36penis
  • 35esophagus
  • 35lymph node
  • 34spinal cord
  • 24spleen
  • 22nerve
  • 19lymphatic vessel
  • 19lymphoid tissue
  • 19ovary
  • 19thyroid gland
  • 18testis
  • 15mouth
  • 12pituitary gland
  • 11bronchus
  • 10breast
  • 9skeleton
  • 9urinary bladder
  • 8bone marrow
  • 8tongue
  • 8vagina
  • 4nose
  • 1pericardium
  • 1trachea
Project
  • 7207AMP
  • 331ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 4438hg19
  • 1818GRCh38
  • 4hg18
month_released!
  • February, 2021
organ_slims!
  • embryo
BIOSAMPLE
TYPE

7916 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
chromatin state
accessible chromatin
candidate regulatory elements
gene expression
eQTL
differential activity
variant allelic effects
histone modifications
binding sites
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
tissue
whole blood26351
heart202151922
stomach211931911
brain1618216121
kidney1416101411
primary cell
monocyte21815484121
CD8-positive, alpha-beta T cell514330
common myeloid progenitor, CD34-positive141313
B cell1086122
endothelial cell71535122
cell line
HeLa-S355331
A54919181181
K562237161
EndoC_BH118831
HFFc619
in vitro differentiated cells
neural progenitor cell54104714
hematopoietic multipotent progenitor cell10101101
adipocyte6642
embryonic stem cell156
extended pluripotent stem (EPS) cells9
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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