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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
195
accessible chromatin
161
target gene predictions
136
gene expression
133
chromatin state
131
candidate regulatory elements
70
differential activity
34
variant allelic effects
25
eQTL
15
binding sites
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
369
September, 2022
February, 2021
157
September, 2023
57
November, 2021
40
June, 2020
38
August, 2021
31
May, 2020
29
November, 2022
26
January, 2020
25
February, 2023
20
February, 2020
20
February, 2024
16
May, 2021
16
October, 2022
12
March, 2020
10
May, 2024
7
August, 2017
7
January, 2022
7
March, 2023
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
October, 2019
2
September, 2018
1
April, 2019
1
August, 2018
1
January, 2018
1
June, 2021
1
May, 2019
Available data
544
bed bed3+
202
tsv
126
bed bed9
126
bigWig
12
txt
4
bigBed bed9
1
bigBed narrowPeak
Organism
910
Homo sapiens
Biosample type
465
primary cell
347
tissue
51
cell line
46
in vitro differentiated cells
1
stem cell
Organ
763
epithelium
464
kidney
359
connective tissue
356
brain
283
musculature of body
246
pancreas
241
lung
220
vasculature
218
intestine
209
heart
186
limb
168
blood vessel
162
embryo
144
bodily fluid
137
blood
136
skin of body
132
liver
128
large intestine
113
extraembryonic component
92
eye
90
stomach
73
uterus
66
adipose tissue
66
small intestine
60
artery
59
adrenal gland
59
mammary gland
55
placenta
53
bone element
49
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
22
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
18
testis
16
vein
15
mouth
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
687
AMP
155
KPMP
57
ENCODE
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
686
hg19
249
GRCh38
2
hg18
month_released!
February, 2021
BIOSAMPLE
TYPE
910 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
chromatin state
candidate regulatory elements
differential activity
variant allelic effects
eQTL
binding sites
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
3
6
2
1
pericyte cell
10
10
1
3
fibroblast of lung
4
4
3
2
fibroblast of cardiac tissue
2
4
3
3
fibroblast of dermis
4
3
3
1
+ See 100 more…
tissue
kidney
10
14
16
14
1
1
retina
23
3
1
3
3
1
1
right kidney
1
10
10
10
1
renal pelvis
2
9
9
9
1
renal cortex interstitium
1
9
9
9
1
+ See 26 more…
cell line
HEK293
1
1
1
1
1
WERI-Rb-1
1
1
1
1
1
ACHN
1
1
1
1
Caki2
1
1
1
1
GM23248
1
1
1
1
+ See 14 more…
in vitro differentiated cells
adipocyte
4
6
6
2
mesenchymal stem cell
1
3
2
2
retinal pigment epithelial cell
6
chondrocyte
5
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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