Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 84target gene predictions
  • 28chromatin state
  • 27candidate regulatory elements
  • 12accessible chromatin
  • 10gene expression
  • 1binding sites
Date released
  • 81September, 2022
  • February, 2021
  • 51February, 2024
  • 10June, 2020
  • 8August, 2021
  • 7May, 2021
  • 2November, 2021
  • 1August, 2017
  • 1March, 2020
  • 1October, 2022
Available data
  • 125bed bed3+
  • 27bed bed9
  • 10tsv
  • 2bigWig
Organism
  • 162Homo sapiens
Collection Tags
  • 81EpiMap
  • 514DN
  • 12AMP
  • 10ChIP-Atlas
  • 6DGA
  • 2T2DKP
  • 1ENCODE
Biosample type
  • 99cell line
  • 24tissue
  • 21in vitro differentiated cells
  • 17primary cell
  • 1stem cell
Organ
  • 2864vasculature
  • 2812blood vessel
  • 2785bodily fluid
  • 2778blood
  • 2651vein
  • 762epithelium
  • 464kidney
  • 371connective tissue
  • 357brain
  • 288musculature of body
  • 246pancreas
  • 241lung
  • 218intestine
  • 209heart
  • 186limb
  • 162embryo
  • 137liver
  • 136skin of body
  • 128large intestine
  • 113extraembryonic component
  • 92eye
  • 90stomach
  • 76adipose tissue
  • 73uterus
  • 66small intestine
  • 64artery
  • 59adrenal gland
  • 59mammary gland
  • 55placenta
  • 53bone element
  • 49prostate gland
  • 46ureter
  • 38gonad
  • 38thymus
  • 36penis
  • 35esophagus
  • 35lymph node
  • 34spinal cord
  • 24spleen
  • 22nerve
  • 19lymphatic vessel
  • 19lymphoid tissue
  • 19ovary
  • 19thyroid gland
  • 18testis
  • 15mouth
  • 12pituitary gland
  • 11bronchus
  • 10breast
  • 9skeleton
  • 9urinary bladder
  • 8bone marrow
  • 8tongue
  • 8vagina
  • 4nose
  • 1pericardium
  • 1trachea
Project
  • 160AMP
  • 2ENCODE
Genome assembly (visualization)
  • 152hg19
  • 80GRCh38
month_released!
  • February, 2021
BIOSAMPLE
TYPE

162 results

search-icontable-tab-icon
Clear Filters
target gene predictions
chromatin state
candidate regulatory elements
accessible chromatin
gene expression
binding sites
cell line
H1-hESC3911181
H9811
H7-hESC2111
HUES841
CyT494
tissue
chorionic villus444
trophoblast3221
embryonic facial prominence1111
in vitro differentiated cells
endodermal cell222
trophoblast cell211
cardiac mesoderm primordium111
ectodermal cell111
mesodermal cell111
primary cell
trophoblast cell5441
placental hematopoietic stem cell1
primordial germ cell1
trophoblast giant cell1
stem cell
H1-hESC1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego