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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
232
target gene predictions
227
accessible chromatin
169
gene expression
158
chromatin state
152
candidate regulatory elements
92
differential activity
40
variant allelic effects
16
binding sites
5
eQTL
4
histone modifications
2
caQTL
Date released
463
September, 2022
February, 2021
155
September, 2023
129
November, 2021
76
February, 2024
41
May, 2021
38
March, 2023
37
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
11
October, 2022
9
February, 2020
8
April, 2020
7
March, 2020
6
August, 2018
5
October, 2019
4
August, 2017
3
March, 2024
2
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
673
bed bed3+
240
tsv
176
bigWig
154
bed bed9
12
txt
11
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1097
Homo sapiens
Biosample type
697
primary cell
266
tissue
110
cell line
24
in vitro differentiated cells
Organ
753
epithelium
464
kidney
356
brain
351
connective tissue
283
musculature of body
246
pancreas
241
lung
218
intestine
217
vasculature
207
heart
186
limb
168
blood vessel
162
embryo
144
bodily fluid
137
blood
136
skin of body
130
liver
128
large intestine
113
extraembryonic component
92
eye
90
stomach
73
uterus
66
adipose tissue
66
small intestine
60
artery
59
adrenal gland
59
mammary gland
55
placenta
53
bone element
49
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
22
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
testis
16
lymphatic vessel
16
vein
15
mouth
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
783
AMP
155
KPMP
129
ENCODE
20
T1D
8
LungMap
2
community
Genome assembly (visualization)
830
hg19
342
GRCh38
month_released!
February, 2021
BIOSAMPLE
TYPE
1097 results
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Clear Filters
target gene predictions
accessible chromatin
gene expression
chromatin state
candidate regulatory elements
differential activity
variant allelic effects
binding sites
eQTL
histone modifications
caQTL
primary cell
endothelial cell
7
15
5
2
1
2
hepatocyte
3
8
10
1
1
2
3
pancreatic beta cell
2
8
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
pancreatic acinar cell
3
6
3
3
1
+ See 138 more…
tissue
lung
17
1
16
16
1
placenta
15
1
14
14
1
left lung
13
13
13
right lung
11
1
11
11
pigmented layer of retina
20
+ See 23 more…
cell line
A549
19
1
18
18
1
EndoC_BH1
1
8
8
3
1
IMR-90
2
1
1
1
1
PC-9
2
1
1
1
NCI-H226 cell
1
1
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
trophoblast cell
2
1
1
hepatocyte
1
1
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
+ See 5 more…
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