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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
228
accessible chromatin
179
gene expression
167
target gene predictions
100
chromatin state
97
differential activity
88
candidate regulatory elements
51
variant allelic effects
15
binding sites
10
eQTL
9
Fine-mapped variants
5
caQTL
4
histone modifications
Date released
271
September, 2022
February, 2021
165
September, 2023
127
November, 2021
79
February, 2024
38
March, 2023
38
May, 2021
30
June, 2020
25
January, 2020
25
May, 2020
24
August, 2021
20
January, 2021
18
March, 2020
16
February, 2023
15
November, 2022
13
February, 2020
10
October, 2022
7
April, 2020
7
October, 2019
6
August, 2018
4
August, 2017
4
January, 2022
4
November, 2019
3
March, 2024
2
May, 2022
1
July, 2020
1
May, 2019
Available data
558
bed bed3+
266
tsv
185
bigWig
96
bed bed9
12
txt
11
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
953
Homo sapiens
Biosample type
695
primary cell
185
tissue
53
cell line
20
in vitro differentiated cells
Organ
753
epithelium
464
kidney
356
brain
351
connective tissue
283
musculature of body
246
pancreas
241
lung
218
intestine
217
vasculature
207
heart
186
limb
168
blood vessel
162
embryo
144
bodily fluid
137
blood
136
skin of body
130
liver
128
large intestine
113
extraembryonic component
92
eye
90
stomach
73
uterus
66
adipose tissue
66
small intestine
60
artery
59
adrenal gland
59
mammary gland
55
placenta
53
bone element
49
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
22
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
testis
16
lymphatic vessel
16
vein
15
mouth
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
632
AMP
165
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
666
hg19
310
GRCh38
month_released!
February, 2021
BIOSAMPLE
TYPE
953 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
chromatin state
differential activity
candidate regulatory elements
variant allelic effects
binding sites
eQTL
Fine-mapped variants
caQTL
histone modifications
primary cell
endothelial cell
15
5
7
2
1
2
hepatocyte
8
10
3
1
1
2
3
pancreatic beta cell
8
3
2
3
1
endothelial cell of hepatic sinusoid
6
4
6
pancreatic acinar cell
6
3
3
3
1
+ See 139 more…
tissue
small intestine
1
17
15
15
1
coronary artery
3
1
3
3
2
2
2
3
1
pigmented layer of retina
20
tibial artery
3
1
2
3
2
2
2
3
ascending aorta
1
2
3
2
1
1
3
+ See 22 more…
cell line
EndoC_BH1
8
8
1
3
1
MCF-7
1
6
5
5
1
T47D
2
2
2
colon epithelial cell
1
1
1
glomerular visceral epithelial cell
1
1
+ See 3 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
1
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
+ See 4 more…
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