Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 212accessible chromatin
  • 168gene expression
  • 120target gene predictions
  • 92differential activity
  • 57candidate regulatory elements
  • 53chromatin state
  • 40variant allelic effects
  • 11binding sites
  • 4histone modifications
  • 3eQTL
  • 2caQTL
Date released
  • February, 2021
  • 155September, 2023
  • 151September, 2022
  • 127November, 2021
  • 76February, 2024
  • 38March, 2023
  • 34May, 2021
  • 25June, 2020
  • 23August, 2021
  • 20January, 2021
  • 15May, 2020
  • 15November, 2022
  • 14January, 2020
  • 12February, 2023
  • 9February, 2020
  • 9May, 2024
  • 7April, 2020
  • 6August, 2018
  • 6March, 2020
  • 6October, 2022
  • 5October, 2019
  • 3August, 2017
  • 2March, 2024
  • 2May, 2022
  • 1July, 2020
  • 1November, 2019
Available data
  • 446bed bed3+
  • 239tsv
  • 173bigWig
  • 50bed bed9
  • 12txt
  • 11bigBed narrowPeak
  • 6csv
  • 3bam
  • 3bed gappedPeak
  • 3xls
  • 2bigBed bed9
Organism
  • 762Homo sapiens
Collection Tags
  • 159AMP
  • 155KPMP
  • 147T2DKP
  • 144EpiMap
  • 114DGA
  • 46 T2DKP
  • 44HPAP
  • 35T1D
  • 30CMDGA
  • 25ChIP-Atlas
  • 11ENCODE
  • 6FNIH_projects-heart
  • 4T2D
  • 3FNIH_projects-liver
  • 2GTEx
Biosample type
  • 664primary cell
  • 49tissue
  • 29cell line
  • 20in vitro differentiated cells
Organ
  • 2864vasculature
  • 2812blood vessel
  • 2785bodily fluid
  • 2778blood
  • 2651vein
  • 762epithelium
  • 464kidney
  • 371connective tissue
  • 357brain
  • 288musculature of body
  • 246pancreas
  • 241lung
  • 218intestine
  • 209heart
  • 186limb
  • 162embryo
  • 137liver
  • 136skin of body
  • 128large intestine
  • 113extraembryonic component
  • 92eye
  • 90stomach
  • 76adipose tissue
  • 73uterus
  • 66small intestine
  • 64artery
  • 59adrenal gland
  • 59mammary gland
  • 55placenta
  • 53bone element
  • 49prostate gland
  • 46ureter
  • 38gonad
  • 38thymus
  • 36penis
  • 35esophagus
  • 35lymph node
  • 34spinal cord
  • 24spleen
  • 22nerve
  • 19lymphatic vessel
  • 19lymphoid tissue
  • 19ovary
  • 19thyroid gland
  • 18testis
  • 15mouth
  • 12pituitary gland
  • 11bronchus
  • 10breast
  • 9skeleton
  • 9urinary bladder
  • 8bone marrow
  • 8tongue
  • 8vagina
  • 4nose
  • 1pericardium
  • 1trachea
Project
  • 451AMP
  • 155KPMP
  • 127ENCODE
  • 20T1D
  • 7LungMap
  • 2community
Genome assembly (visualization)
  • 498hg19
  • 243GRCh38
month_released!
  • February, 2021
BIOSAMPLE
TYPE

762 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell15573212
hepatocyte81032123
pancreatic beta cell83231
endothelial cell of hepatic sinusoid646
pancreatic acinar cell63331
tissue
pigmented layer of retina20
breast epithelium1322
esophagus squamous epithelium1222
pancreatic ductal cell2
breast - mammary tissue1
cell line
EndoC_BH188131
colon epithelial cell111
glomerular visceral epithelial cell11
choroid plexus epithelial cell1
epithelial cell of prostate1
in vitro differentiated cells
retinal pigment epithelial cell6
hepatocyte111
hepatocyte(AFP)3
pancreatic ductal cell3
dermis microvascular lymphatic vessel endothelial cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego