Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 25target gene predictions
  • 8candidate regulatory elements
  • 8chromatin state
  • 5accessible chromatin
  • 3eQTL
  • 2gene expression
  • 1binding sites
Date released
  • 24September, 2022
  • 14July, 2026
  • February, 2021
  • 4June, 2020
  • 3January, 2022
  • 2March, 2024
  • 2November, 2021
  • 1March, 2020
  • 1May, 2021
  • 1October, 2022
Available data
  • 42bed bed3+
  • 8bed bed9
  • 2tsv
  • 1bigWig
Organism
  • 52Homo sapiens
Collection Tags
  • 24EpiMap
  • 14ENCODE-rE2G
  • 4ChIP-Atlas
  • 3T1D
  • 3T2D
  • 3eQTLCatalogue
  • 2AMP
  • 2DGA
  • 2GTEx
  • 2T2DKP
  • 1ENCODE
Biosample type
  • 42tissue
  • 6cell line
  • 4primary cell
Organ
  • 3295blood
  • 2853vasculature
  • 2825blood vessel
  • 2779bodily fluid
  • 2652vein
  • 793brain
  • 756epithelium
  • 568kidney
  • 440heart
  • 409connective tissue
  • 370lung
  • 294musculature of body
  • 288pancreas
  • 287intestine
  • 228skin of body
  • 214liver
  • 186limb
  • 180large intestine
  • 162embryo
  • 144eye
  • 141extraembryonic component
  • 119adipose tissue
  • 111muscle organ
  • 111stomach
  • 88adrenal gland
  • 83uterus
  • 82thymus
  • 79placenta
  • 79small intestine
  • 76mammary gland
  • 73artery
  • 70bone element
  • 60__MARKER__
  • 58prostate gland
  • 55ureter
  • 53spleen
  • 52gonad
  • 43thyroid gland
  • 40spinal cord
  • 38esophagus
  • 36penis
  • 35lymph node
  • 28ovary
  • 23testis
  • 22nerve
  • 19lymphoid tissue
  • 17mouth
  • 16lymphatic vessel
  • 15skeleton
  • 12breast
  • 12pituitary gland
  • 12urinary bladder
  • 11bronchus
  • 10tongue
  • 10vagina
  • 8bone marrow
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
  • 1trachea
Project
  • 50AMP
  • 2ENCODE
Genome assembly (visualization)
  • 33hg19
  • 27GRCh38
month_released!
  • February, 2021
BIOSAMPLE
TYPE

52 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
eQTL
gene expression
binding sites
tissue
ovary1544111
testis733111
cell line
NT2-D1 cell11111
NT2/D11
primary cell
luteal cell11
Leydig cell1
somatic gonadal cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego