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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
96
target gene predictions
36
chromatin state
33
candidate regulatory elements
10
accessible chromatin
2
eQTL
2
gene expression
1
binding sites
Date released
98
September, 2022
52
July, 2026
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
145
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
180
Homo sapiens
Collection Tags
99
EpiMap
52
ENCODE-rE2G
7
ChIP-Atlas
6
AMP
6
DGA
6
T2DKP
2
4DN
2
GTEx
2
T1D
2
T2D
2
eQTLCatalogue
1
ENCODE
Biosample type
129
tissue
45
cell line
6
primary cell
Organ
3295
blood
2853
vasculature
2825
blood vessel
2779
bodily fluid
2652
vein
793
brain
756
epithelium
568
kidney
440
heart
409
connective tissue
370
lung
294
musculature of body
288
pancreas
287
intestine
228
skin of body
214
liver
186
limb
180
large intestine
162
embryo
144
eye
141
extraembryonic component
119
adipose tissue
111
muscle organ
111
stomach
88
adrenal gland
83
uterus
82
thymus
79
placenta
79
small intestine
76
mammary gland
73
artery
70
bone element
60
__MARKER__
58
prostate gland
55
ureter
53
spleen
52
gonad
43
thyroid gland
40
spinal cord
38
esophagus
36
penis
35
lymph node
28
ovary
23
testis
22
nerve
19
lymphoid tissue
17
mouth
16
lymphatic vessel
15
skeleton
12
breast
12
pituitary gland
12
urinary bladder
11
bronchus
10
tongue
10
vagina
8
bone marrow
4
nose
1
embryonic structure
1
gallbladder
1
pericardium
1
trachea
Project
174
AMP
6
ENCODE
Genome assembly (visualization)
124
hg19
95
GRCh38
month_released!
February, 2021
BIOSAMPLE
TYPE
180 results
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target gene predictions
chromatin state
candidate regulatory elements
accessible chromatin
eQTL
gene expression
binding sites
tissue
large intestine
28
13
13
1
sigmoid colon
10
5
5
1
transverse colon
9
4
4
1
1
colonic mucosa
4
3
2
mucosa of rectum
2
3
2
+ See 7 more…
cell line
HCT116
19
1
1
HT-29
3
1
1
1
SW480
2
1
1
1
Caco-2
3
HCT-116 cell
1
1
1
+ See 4 more…
primary cell
colon epithelial cell
3
3
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