Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 19target gene predictions
  • 15chromatin state
  • 14candidate regulatory elements
  • 7accessible chromatin
  • 3binding sites
  • 1variant allelic effects
Date released
  • 42September, 2022
  • February, 2021
  • 6November, 2021
  • 4June, 2020
  • 3October, 2022
  • 2May, 2021
  • 1August, 2017
  • 1February, 2024
Available data
  • 45bed bed3+
  • 14bed bed9
  • 3bigWig
Organism
  • 59Homo sapiens
Collection Tags
  • 42EpiMap
  • 6AMP
  • 6T2DKP
  • 4ChIP-Atlas
  • 3DGA
  • 3ENCODE
Biosample type
  • 34primary cell
  • 24cell line
  • 1in vitro differentiated cells
Organ
  • 2864vasculature
  • 2812blood vessel
  • 2785bodily fluid
  • 2778blood
  • 2651vein
  • 762epithelium
  • 464kidney
  • 371connective tissue
  • 357brain
  • 288musculature of body
  • 246pancreas
  • 241lung
  • 218intestine
  • 209heart
  • 186limb
  • 162embryo
  • 137liver
  • 136skin of body
  • 128large intestine
  • 113extraembryonic component
  • 92eye
  • 90stomach
  • 76adipose tissue
  • 73uterus
  • 66small intestine
  • 64artery
  • 59adrenal gland
  • 59mammary gland
  • 55placenta
  • 53bone element
  • 49prostate gland
  • 46ureter
  • 38gonad
  • 38thymus
  • 36penis
  • 35esophagus
  • 35lymph node
  • 34spinal cord
  • 24spleen
  • 22nerve
  • 19lymphatic vessel
  • 19lymphoid tissue
  • 19ovary
  • 19thyroid gland
  • 18testis
  • 15mouth
  • 12pituitary gland
  • 11bronchus
  • 10breast
  • 9skeleton
  • 9urinary bladder
  • 8bone marrow
  • 8tongue
  • 8vagina
  • 4nose
  • 1pericardium
  • 1trachea
Project
  • 53AMP
  • 6ENCODE
Genome assembly (visualization)
  • 59hg19
  • 20GRCh38
month_released!
  • February, 2021
BIOSAMPLE
TYPE

59 results

search-icontable-tab-icon
Clear Filters
target gene predictions
chromatin state
candidate regulatory elements
accessible chromatin
binding sites
variant allelic effects
primary cell
mammary gland epithelial cell43311
luminal epithelial cell of mammary gland3112
myoepithelial cell of mammary gland222
fibroblast of mammary gland11111
mammary epithelial cell1111
cell line
MCF-765511
T47D222
in vitro differentiated cells
mammary gland epithelial cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego