Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 65accessible chromatin
  • 42gene expression
  • 42target gene predictions
  • 33differential activity
  • 17chromatin state
  • 14eQTL
  • 13candidate regulatory elements
  • 10variant allelic effects
  • 5Fine-mapped variants
  • 2sQTL
  • 2variant to gene
  • 1binding sites
Date released
  • 47March, 2023
  • 44September, 2022
  • 33May, 2021
  • February, 2021
  • 25February, 2024
  • 20January, 2021
  • 18November, 2021
  • 9March, 2020
  • 8August, 2021
  • 7August, 2018
  • 6May, 2020
  • 6October, 2019
  • 4January, 2020
  • 4January, 2022
  • 4June, 2020
  • 3August, 2017
  • 2February, 2020
  • 2November, 2019
  • 1April, 2019
  • 1February, 2023
  • 1January, 2018
  • 1June, 2021
Available data
  • 146bed bed3+
  • 70tsv
  • 54bigWig
  • 13bed bed9
  • 11bigBed narrowPeak
  • 3bam
  • 3bed gappedPeak
  • 3csv
  • 3xls
  • 2bigBed bed9
Organism
  • 246Homo sapiens
Collection Tags
  • 58 T2DKP
  • 48HPAP
  • 46T2DKP
  • 42AMP
  • 42T1D
  • 39EpiMap
  • 28DGA
  • 9CMDGA
  • 7T2D
  • 5GTEx
  • 4ChIP-Atlas
  • 4eQTLCatalogue
Biosample type
  • 119primary cell
  • 93tissue
  • 31cell line
  • 3in vitro differentiated cells
Organ
  • 2864vasculature
  • 2812blood vessel
  • 2785bodily fluid
  • 2778blood
  • 2651vein
  • 762epithelium
  • 464kidney
  • 371connective tissue
  • 357brain
  • 288musculature of body
  • 246pancreas
  • 241lung
  • 218intestine
  • 209heart
  • 186limb
  • 162embryo
  • 137liver
  • 136skin of body
  • 128large intestine
  • 113extraembryonic component
  • 92eye
  • 90stomach
  • 76adipose tissue
  • 73uterus
  • 66small intestine
  • 64artery
  • 59adrenal gland
  • 59mammary gland
  • 55placenta
  • 53bone element
  • 49prostate gland
  • 46ureter
  • 38gonad
  • 38thymus
  • 36penis
  • 35esophagus
  • 35lymph node
  • 34spinal cord
  • 24spleen
  • 22nerve
  • 19lymphatic vessel
  • 19lymphoid tissue
  • 19ovary
  • 19thyroid gland
  • 18testis
  • 15mouth
  • 12pituitary gland
  • 11bronchus
  • 10breast
  • 9skeleton
  • 9urinary bladder
  • 8bone marrow
  • 8tongue
  • 8vagina
  • 4nose
  • 1pericardium
  • 1trachea
Project
  • 206AMP
  • 20T1D
  • 18ENCODE
  • 2community
Genome assembly (visualization)
  • 161hg19
  • 61GRCh38
month_released!
  • February, 2021
BIOSAMPLE
TYPE

246 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
chromatin state
eQTL
candidate regulatory elements
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
binding sites
primary cell
pancreatic beta cell83231
pancreatic acinar cell63331
pancreatic delta cell53431
pancreatic ductal cell63331
pancreatic alpha cell7323
tissue
islet of Langerhans65131212221
body of pancreas2541413
pancreas553121
endocrine pancreas444
pancreatic ductal cell2
cell line
EndoC_BH188131
Panc1211
8988T111
HPDE6-E6E7111
in vitro differentiated cells
pancreatic ductal cell3
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego