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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • 1355target gene predictions
  • 944chromatin state
  • 902accessible chromatin
  • 872candidate regulatory elements
  • 512gene expression
  • 172differential activity
  • 140variant allelic effects
  • 137histone modifications
  • 99binding sites
  • 72Fine-mapped variants
  • 58eQTL
  • 13caQTL
  • 5hQTL
  • 4sQTL
  • 3meQTL
  • 3other
  • 2variant to gene
Date released
  • 2636February, 2025
  • February, 2021
  • 2511September, 2022
  • 389May, 2021
  • 373February, 2024
  • 333November, 2021
  • 289June, 2020
  • 286September, 2023
  • 155May, 2020
  • 128August, 2021
  • 128March, 2020
  • 101October, 2022
  • 89January, 2020
  • 64March, 2023
  • 63February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 38May, 2024
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 11March, 2025
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 5January, 2022
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 3565bed bed3+
  • 3363tsv
  • 869bed bed9
  • 532bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 25txt
  • 24csv
  • 13bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 7883Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 513AMP
  • 477DGA
  • 405T2DKP
  • 314T1D
  • 290ChIP-Atlas
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 149GTEx
  • 147 T2DKP
  • 128ENCODE
  • 94CMDGA
  • 67HPAP
  • 26FNIH_projects-heart
  • 16STARNET
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 10T2D
Biosample type
  • 4595tissue
  • 2011primary cell
  • 1038cell line
  • 281in vitro differentiated cells
  • 4stem cell
Organ
  • 2855vasculature
  • 2803blood vessel
  • 2779bodily fluid
  • 2772blood
  • 2651vein
  • 761epithelium
  • 463kidney
  • 354connective tissue
  • 340brain
  • 282musculature of body
  • 240lung
  • 236pancreas
  • 215intestine
  • 206heart
  • 184limb
  • 162embryo
  • 133liver
  • 133skin of body
  • 126large intestine
  • 112extraembryonic component
  • 91eye
  • 89stomach
  • 72uterus
  • 67adipose tissue
  • 65small intestine
  • 59mammary gland
  • 58adrenal gland
  • 58artery
  • 54placenta
  • 53bone element
  • 48prostate gland
  • 46ureter
  • 38thymus
  • 36penis
  • 35gonad
  • 35lymph node
  • 33spinal cord
  • 32esophagus
  • 23spleen
  • 21nerve
  • 19lymphatic vessel
  • 19lymphoid tissue
  • 18ovary
  • 18thyroid gland
  • 16testis
  • 14mouth
  • 11bronchus
  • 11pituitary gland
  • 9breast
  • 9skeleton
  • 9urinary bladder
  • 8bone marrow
  • 8tongue
  • 7vagina
  • 4nose
  • 1pericardium
  • 1trachea
Project
  • 7224AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 9community
  • 5ITG
Genome assembly (visualization)
  • 4585hg19
  • 1796GRCh38
  • 4hg18
month_released!
  • February, 2021
software_used.software.name!
  • qTLtools
BIOSAMPLE
TYPE

7931 results

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Clear Filters
pQTL
target gene predictions
chromatin state
accessible chromatin
candidate regulatory elements
gene expression
differential activity
variant allelic effects
histone modifications
binding sites
Fine-mapped variants
eQTL
caQTL
hQTL
sQTL
meQTL
other
variant to gene
tissue
whole blood26351
heart202151922
stomach21193191
kidney1416101411
brain161821611
primary cell
monocyte21815841211
CD8-positive, alpha-beta T cell514330
common myeloid progenitor, CD34-positive141313
B cell1086122
endothelial cell7153522
cell line
HeLa-S355331
A54919181181
H1-hESC3911181
K562237161
EndoC_BH118831
in vitro differentiated cells
neural progenitor cell54104714
hematopoietic multipotent progenitor cell10101101
adipocyte6642
embryonic stem cell156
extended pluripotent stem (EPS) cells9
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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