Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
88
candidate regulatory elements
60
target gene predictions
56
accessible chromatin
48
chromatin state
48
gene expression
31
binding sites
25
histone modifications
21
eQTL
16
variant allelic effects
8
differential activity
6
Fine-mapped variants
2
pQTL
1
caQTL
Date released
120
September, 2022
109
February, 2021
November, 2021
20
June, 2020
18
February, 2024
17
September, 2023
16
May, 2021
12
October, 2022
11
August, 2021
10
January, 2020
10
May, 2020
10
May, 2024
9
February, 2020
9
March, 2020
7
August, 2017
March, 2023
7
November, 2022
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
February, 2023
1
January, 2018
1
June, 2021
Available data
287
bed bed3+
58
tsv
41
bed bed9
23
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
410
Homo sapiens
Biosample type
233
primary cell
95
tissue
50
in vitro differentiated cells
31
cell line
1
stem cell
Organ
782
epithelium
649
kidney
466
brain
410
connective tissue
364
musculature of body
302
lung
270
intestine
255
vasculature
244
heart
244
limb
218
bodily fluid
213
embryo
211
pancreas
207
blood
194
skin of body
193
blood vessel
168
large intestine
149
liver
143
extraembryonic component
110
stomach
89
adipose tissue
88
bone element
81
eye
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
72
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
lymphatic vessel
21
ovary
21
thyroid gland
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
384
AMP
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
345
hg19
79
GRCh38
2
hg18
month_released!
February, 2023
March, 2023
November, 2021
BIOSAMPLE
TYPE
410 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
pQTL
caQTL
primary cell
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
fibroblast
3
2
1
2
6
fibroblast of dermis
4
4
3
1
+ See 41 more…
tissue
adipose tissue
7
8
2
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 6 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download