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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
9
ATAC-seq
5
total RNA-seq
2
DNase-seq
2
pCHi-C
Assay category
35
DNA binding
11
DNA accessibility
5
Transcription
Target of assay
24
histone
24
histone modification
16
broad histone mark
11
control
8
narrow histone mark
Date released
42
October, 2019
8
February, 2021
February, 2023
2
March, 2020
1
February, 2020
Available data
50
bam
35
bed narrowPeak
31
bigWig
26
bigBed narrowPeak
7
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
53
Homo sapiens
Biosample type
53
tissue
Organ
885
pancreas
791
liver
669
connective tissue
489
adipose tissue
472
epithelium
357
heart
354
kidney
269
brain
201
vasculature
195
blood vessel
151
bone element
122
limb
106
artery
96
musculature of body
69
blood
69
bodily fluid
43
nerve
37
embryo
30
eye
24
spleen
22
vein
20
lung
18
ureter
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
53
AMP
Genome assembly (visualization)
39
GRCh38
39
hg19
Lab
53
AMP-T2D consortium
month_released!
February, 2023
October, 2017
BIOSAMPLE
ASSAY
53 results
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ChIP-seq
ATAC-seq
total RNA-seq
DNase-seq
pCHi-C
tissue
tibial nerve
35
1
5
2
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
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