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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
258
gene expression
217
accessible chromatin
179
candidate regulatory elements
166
target gene predictions
94
chromatin state
91
differential activity
49
binding sites
45
variant allelic effects
36
histone modifications
10
eQTL
6
Fine-mapped variants
1
caQTL
Date released
268
September, 2022
240
February, 2021
155
September, 2023
129
November, 2021
76
February, 2024
39
May, 2021
38
March, 2023
33
June, 2020
23
August, 2021
20
January, 2021
20
May, 2020
18
January, 2020
February, 2023
15
November, 2022
12
February, 2020
12
March, 2020
10
May, 2024
8
October, 2022
7
April, 2020
6
August, 2018
5
January, 2022
5
October, 2019
3
August, 2017
3
March, 2024
3
November, 2019
2
May, 2022
1
July, 2020
1
May, 2019
Available data
692
bed bed3+
335
tsv
177
bigWig
91
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1152
Homo sapiens
Biosample type
873
primary cell
199
tissue
49
cell line
31
in vitro differentiated cells
Organ
947
epithelium
652
kidney
467
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
276
pancreas
265
vasculature
254
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
200
blood vessel
174
large intestine
158
liver
146
extraembryonic component
119
stomach
89
adipose tissue
89
bone element
87
mammary gland
85
eye
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
72
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
839
AMP
155
KPMP
129
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
795
hg19
304
GRCh38
month_released!
February, 2023
BIOSAMPLE
TYPE
1152 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
3
7
2
2
1
1
1
hepatocyte
13
8
2
3
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 155 more…
tissue
placenta
1
26
15
14
1
2
1
coronary artery
1
2
3
3
3
2
2
3
tibial artery
1
3
3
2
3
2
2
3
chorionic villus
8
4
4
breast epithelium
1
5
3
2
+ See 26 more…
cell line
EndoC_BH1
8
8
1
2
1
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
HTR-8/Svneo
1
1
1
choroid plexus epithelial cell
1
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
trophoblast cell
2
2
1
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
+ See 5 more…
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