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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 56total RNA-seq
  • 34ChIP-seq
  • 10ATAC-seq
  • 4DNase-seq
  • 2single cell RNA-seq
Assay category
  • 58Transcription
  • 34DNA binding
  • 14DNA accessibility
Target of assay
  • 20histone
  • 20histone modification
  • 14broad histone mark
  • 9control
  • 6narrow histone mark
  • 5transcription factor
  • 1RNA binding protein
Date released
  • 66February, 2021
  • February, 2023
  • 26October, 2019
  • 5May, 2019
  • 3July, 2019
  • 2August, 2021
  • 2February, 2020
  • 2June, 2019
Available data
  • 102bam
  • 85bigWig
  • 58tsv
  • 39bed narrowPeak
  • 25bigBed narrowPeak
  • 6tagAlign
  • 4bed bed3+
  • 4bed broadPeak
  • 4bigBed broadPeak
Organism
  • 106Homo sapiens
Biosample type
  • 66cell line
  • 38tissue
  • 2primary cell
Organ
  • 890pancreas
  • 791liver
  • 670connective tissue
  • 490adipose tissue
  • 472epithelium
  • 357heart
  • 354kidney
  • 285brain
  • 201vasculature
  • 195blood vessel
  • 151bone element
  • 122limb
  • 106artery
  • 96musculature of body
  • 69blood
  • 69bodily fluid
  • 43nerve
  • 37embryo
  • 30eye
  • 25spleen
  • 22vein
  • 20lung
  • 18ureter
  • 8skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pericardium
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 106AMP
Genome assembly (visualization)
  • 93GRCh38
  • 93hg19
Lab
  • 106AMP-T2D consortium
month_released!
  • February, 2023
BIOSAMPLE
ASSAY

106 results

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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery5268
tissue
tibial artery12312
coronary artery1512
pulmonary artery2
primary cell
endothelial cell of coronary artery1
smooth muscle cell of the coronary artery1
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