Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
232
target gene predictions
230
candidate regulatory elements
149
accessible chromatin
140
chromatin state
93
gene expression
87
histone modifications
62
binding sites
59
eQTL
45
Fine-mapped variants
33
variant allelic effects
18
differential activity
2
caQTL
2
pQTL
Date released
355
September, 2022
250
February, 2021
99
February, 2024
57
March, 2020
56
November, 2021
46
June, 2020
37
January, 2020
32
May, 2021
29
February, 2020
28
May, 2020
26
January, 2022
21
August, 2021
20
September, 2023
19
October, 2022
16
August, 2017
11
March, 2023
11
May, 2024
7
November, 2022
5
May, 2022
4
May, 2019
3
April, 2020
3
March, 2024
3
November, 2020
3
September, 2018
2
January, 2021
2
November, 2019
2
October, 2019
1
August, 2018
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
Available data
806
bed bed3+
161
tsv
124
bed bed9
94
bigWig
9
bigBed bed9
7
txt
3
csv
1
bam
1
bigBed narrowPeak
Organism
1151
Homo sapiens
Biosample type
515
tissue
376
primary cell
198
cell line
61
in vitro differentiated cells
2
stem cell
Organ
947
epithelium
652
kidney
467
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
276
pancreas
265
vasculature
254
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
200
blood vessel
174
large intestine
158
liver
146
extraembryonic component
119
stomach
89
adipose tissue
89
bone element
87
mammary gland
85
eye
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
72
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1070
AMP
56
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
1004
hg19
393
GRCh38
4
hg18
month_released!
February, 2023
BIOSAMPLE
TYPE
1152 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
gene expression
histone modifications
binding sites
eQTL
Fine-mapped variants
variant allelic effects
differential activity
caQTL
pQTL
tissue
brain
16
29
2
18
1
3
1
2
1
liver
10
13
4
9
1
2
1
7
1
1
adipose tissue
8
7
2
6
3
1
4
1
caudate nucleus
3
5
2
4
1
1
2
3
1
subcutaneous adipose tissue
2
2
1
5
6
3
1
1
+ See 73 more…
primary cell
hepatocyte
3
2
8
1
13
4
1
2
fibroblast
4
3
16
1
2
6
pericyte cell
10
3
10
1
osteoblast
2
2
5
1
2
2
3
endothelial cell of hepatic sinusoid
6
4
6
+ See 56 more…
cell line
HeLa-S3
55
5
3
1
HepG2
3
2
2
2
5
3
SK-N-DZ
2
4
1
2
1
SK-N-SH
3
4
2
1
pituitary stalk
10
+ See 25 more…
in vitro differentiated cells
adipocyte
6
4
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
hepatocyte
1
2
1
hepatocyte(AFP)
3
+ See 13 more…
stem cell
mesenchymal stem cell
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download