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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
252
gene expression
193
accessible chromatin
115
target gene predictions
92
candidate regulatory elements
91
differential activity
50
chromatin state
43
binding sites
40
variant allelic effects
28
histone modifications
3
eQTL
1
caQTL
Date released
191
February, 2021
155
September, 2023
142
September, 2022
118
November, 2021
75
February, 2024
38
March, 2023
33
May, 2021
24
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
February, 2023
9
February, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
April, 2020
5
October, 2019
3
August, 2017
2
May, 2022
1
July, 2020
1
March, 2024
1
November, 2019
Available data
511
bed bed3+
322
tsv
161
bigWig
78
txt
47
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
908
Homo sapiens
Biosample type
801
primary cell
42
cell line
39
tissue
26
in vitro differentiated cells
Organ
937
epithelium
652
kidney
466
brain
459
connective tissue
375
musculature of body
lung
289
intestine
276
pancreas
262
vasculature
252
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
200
blood vessel
174
large intestine
156
liver
146
extraembryonic component
119
stomach
89
adipose tissue
89
bone element
87
mammary gland
85
eye
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
72
artery
64
penis
64
ureter
62
lymph node
50
gonad
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
608
AMP
155
KPMP
118
ENCODE
20
T1D
5
LungMap
2
community
Genome assembly (visualization)
562
hg19
221
GRCh38
month_released!
February, 2023
organ_slims!
breast
lung
thymus
BIOSAMPLE
TYPE
908 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
1
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 142 more…
cell line
EndoC_BH1
8
8
1
2
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
tissue
esophagus squamous epithelium
1
2
6
2
pigmented layer of retina
10
kidney epithelium
1
1
pancreatic ductal cell
2
corneal epithelium
1
+ See 13 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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