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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
68
candidate regulatory elements
42
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
98
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
134
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
171
Homo sapiens
Biosample type
133
tissue
32
cell line
6
primary cell
Organ
853
epithelium
651
kidney
465
brain
440
connective tissue
360
musculature of body
310
lung
283
intestine
250
heart
249
vasculature
244
limb
232
pancreas
203
skin of body
190
bodily fluid
189
blood vessel
179
blood
171
large intestine
164
embryo
146
extraembryonic component
127
liver
117
stomach
108
eye
87
adipose tissue
87
bone element
86
mammary gland
84
small intestine
77
prostate gland
75
artery
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
uterus
26
testis
25
nerve
23
lymphoid tissue
23
ovary
23
vein
22
thyroid gland
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
breast
13
pituitary gland
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
165
AMP
6
ENCODE
Genome assembly (visualization)
167
hg19
41
GRCh38
month_released!
February, 2024
January, 2021
organ_slims!
bone marrow
uterus
BIOSAMPLE
TYPE
171 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
26
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 7 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT-116 cell
1
1
2
HCT116
2
1
1
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
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