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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
92
candidate regulatory elements
55
target gene predictions
47
chromatin state
13
accessible chromatin
7
binding sites
6
histone modifications
4
gene expression
3
eQTL
Date released
131
September, 2022
61
February, 2021
10
June, 2020
6
May, 2021
6
November, 2021
February, 2024
4
March, 2024
3
August, 2017
3
January, 2022
2
March, 2020
November, 2019
1
October, 2022
Available data
176
bed bed3+
44
bed bed9
4
tsv
3
bigWig
Organism
227
Homo sapiens
Biosample type
184
tissue
37
cell line
6
primary cell
Organ
872
epithelium
651
kidney
464
brain
442
connective tissue
360
musculature of body
310
lung
283
intestine
250
pancreas
247
heart
246
vasculature
242
limb
203
skin of body
190
bodily fluid
186
blood vessel
179
blood
171
large intestine
164
embryo
146
extraembryonic component
126
liver
117
stomach
108
eye
89
bone element
87
adipose tissue
86
mammary gland
84
small intestine
77
prostate gland
73
artery
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
43
esophagus
43
spinal cord
33
spleen
32
uterus
26
testis
24
nerve
23
lymphoid tissue
23
ovary
23
vein
22
thyroid gland
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
221
AMP
6
ENCODE
Genome assembly (visualization)
220
hg19
53
GRCh38
month_released!
February, 2024
November, 2019
BIOSAMPLE
TYPE
227 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
tissue
large intestine
26
14
13
1
1
spleen
15
8
6
1
1
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
Peyer's patch
7
3
3
1
+ See 11 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
GM18507
1
1
1
1
1
HCT-116 cell
1
1
2
HCT116
2
1
1
+ See 4 more…
primary cell
colon epithelial cell
3
3
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