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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1650candidate regulatory elements
  • 1150target gene predictions
  • 966histone modifications
  • 911chromatin state
  • 852accessible chromatin
  • 798binding sites
  • 605gene expression
  • 182eQTL
  • 167differential activity
  • 85variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2537February, 2021
  • 2430September, 2022
  • 382May, 2021
  • 331November, 2021
  • February, 2024
  • 286September, 2023
  • 279June, 2020
  • 155May, 2020
  • 127March, 2020
  • 120August, 2021
  • 106January, 2022
  • 100October, 2022
  • 89January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 34August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5664bed bed3+
  • 3499tsv
  • 842bed bed9
  • 506bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 5bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 10078Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2417EpiMap
  • 1815ChIP-Atlas
  • 934ENCODE
  • 529DGA
  • 483AMP
  • 395T1D
  • 392T2DKP
  • 281KPMP
  • 194BLUEPRINT
  • 151GTEx
  • 136 T2DKP
  • 111T2D
  • 101eQTLCatalogue
  • 93CMDGA
  • 55HPAP
  • 38STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5262tissue
  • 2343primary cell
  • 2108cell line
  • 408in vitro differentiated cells
  • 3stem cell
Organ
  • 2896vasculature
  • 2833blood vessel
  • 2831bodily fluid
  • 2820blood
  • 2658vein
  • 882epithelium
  • 651kidney
  • 466brain
  • 462connective tissue
  • 365musculature of body
  • 310lung
  • 283intestine
  • 252heart
  • 252pancreas
  • 244limb
  • 203skin of body
  • 171large intestine
  • embryo
  • 146extraembryonic component
  • 134liver
  • 117stomach
  • 108eye
  • 97adipose tissue
  • 89bone element
  • 86mammary gland
  • 84small intestine
  • 79artery
  • 77prostate gland
  • 73placenta
  • 72adrenal gland
  • 64penis
  • 64ureter
  • 62lymph node
  • 50gonad
  • 49thymus
  • 43esophagus
  • 43spinal cord
  • 34spleen
  • 32uterus
  • 26testis
  • 25nerve
  • 24lymphatic vessel
  • 23lymphoid tissue
  • 23ovary
  • 22thyroid gland
  • 19mouth
  • 18skeleton
  • 15bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 9418AMP
  • 331ENCODE
  • 281KPMP
  • 59T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6541hg19
  • 1664GRCh38
  • 4hg18
month_released!
  • February, 2024
organ_slims!
  • embryo
BIOSAMPLE
TYPE

10126 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart37201215132
stomach4021119311
kidney2914216101711
brain291631821121
primary cell
monocyte286181154121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell7530143
B cell1610862
endothelial cell37114282
cell line
A549211911812
MCF-7962513
K562771712
EndoC_BH11181831
breast cancer cell119
in vitro differentiated cells
neural progenitor cell55154107
hematopoietic multipotent progenitor cell1910110111
adipocyte4616311
embryonic stem cell11561
cardiomyocytes11
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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