Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2635pQTL
  • 550target gene predictions
  • 45binding sites
  • 43candidate regulatory elements
  • 25chromatin state
  • 24histone modifications
  • 12accessible chromatin
  • 2eQTL
  • 1gene expression
Date released
  • 2635February, 2025
  • 523July, 2026
  • 70February, 2021
  • 69September, 2022
  • February, 2024
  • 19October, 2022
  • 12June, 2020
  • 4May, 2021
  • 2August, 2017
  • 2August, 2021
  • 1March, 2024
Available data
  • 2636tsv
  • 678bed bed3+
  • 23bed bed9
Organism
  • 3337Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 523ENCODE-rE2G
  • 69EpiMap
  • 62ChIP-Atlas
  • 39ENCODE
  • 4DGA
  • 2AMP
  • 2T2DKP
  • 1GTEx
Biosample type
  • 2638tissue
  • 466primary cell
  • 219cell line
  • 14in vitro differentiated cells
Organ
  • 3337blood
  • 2886vasculature
  • 2847blood vessel
  • 2825bodily fluid
  • 2659vein
  • 902brain
  • 876epithelium
  • 755kidney
  • 502connective tissue
  • 483heart
  • 439lung
  • 372musculature of body
  • 352intestine
  • 295skin of body
  • 294pancreas
  • 244limb
  • 223large intestine
  • 212liver
  • 174extraembryonic component
  • 164embryo
  • 160eye
  • 142adipose tissue
  • 138stomach
  • 111muscle organ
  • 106bone element
  • 103mammary gland
  • 101adrenal gland
  • 97placenta
  • 97small intestine
  • 93thymus
  • 88artery
  • 86prostate gland
  • 73ureter
  • 64gonad
  • 64penis
  • 63spleen
  • 62lymph node
  • 60__MARKER__
  • 49spinal cord
  • 46esophagus
  • 46thyroid gland
  • 42uterus
  • 32ovary
  • 31testis
  • 25nerve
  • 24skeleton
  • 23lymphoid tissue
  • 21lymphatic vessel
  • 21mouth
  • 15breast
  • 15bronchus
  • 13bone marrow
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 3337AMP
Genome assembly (visualization)
  • 546GRCh38
  • 178hg19
month_released!
  • February, 2024
BIOSAMPLE
TYPE

3337 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
binding sites
candidate regulatory elements
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
tissue
whole blood26351
blood2
primary cell
T-cell62
stimulated activated CD4-positive, alpha-beta T cell55
CD4-positive, alpha-beta T cell49
activated CD4-positive, alpha-beta T cell29
stimulated activated CD8-positive, alpha-beta memory T cell27
cell line
K5621427711
GM12878322211
HAP-1412111
HL-60322111
GM06990222111
in vitro differentiated cells
hematopoietic multipotent progenitor cell12
neural crest cell1
trophoblast cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego