Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 88candidate regulatory elements
  • 82accessible chromatin
  • 78target gene predictions
  • 49gene expression
  • 48chromatin state
  • 31binding sites
  • 25histone modifications
  • 24eQTL
  • 14differential activity
  • 9variant allelic effects
  • 8Fine-mapped variants
  • 2caQTL
  • 2pQTL
  • 2sQTL
Date released
  • 120September, 2022
  • 109February, 2021
  • 50November, 2021
  • 20June, 2020
  • February, 2024
  • 17September, 2023
  • 16May, 2021
  • 12October, 2022
  • 11August, 2021
  • 10January, 2020
  • 10March, 2025
  • 10May, 2020
  • 10May, 2024
  • 9February, 2020
  • 9March, 2020
  • 7August, 2017
  • 7March, 2023
  • 7November, 2022
  • 6January, 2022
  • 3April, 2020
  • 3May, 2022
  • 3November, 2020
  • 2January, 2021
  • 2January, 2025
  • 2October, 2019
  • 2September, 2018
  • 1August, 2018
  • 1February, 2023
  • 1January, 2018
  • 1June, 2021
Available data
  • 333bed bed3+
  • 73tsv
  • 53bigWig
  • 41bed bed9
  • 7txt
  • 2bigBed bed9
  • 2csv
  • 1bigBed narrowPeak
Organism
  • 462Homo sapiens
Collection Tags
  • 120EpiMap
  • 68AMP
  • 67T2DKP
  • 65ChIP-Atlas
  • 60ENCODE
  • 58DGA
  • 33 T2DKP
  • 15KPMP
  • 10GTEx
  • 10STARNET
  • 9T1D
  • 8CMDGA
  • 7HPAP
  • 7T2D
  • 6FNIH_projects-heart
  • 6eQTLCatalogue
  • 2FNIH_projects-liver
  • 1BLUEPRINT
Biosample type
  • 280primary cell
  • 101tissue
  • 49in vitro differentiated cells
  • 31cell line
  • 1stem cell
Organ
  • 2896vasculature
  • 2833blood vessel
  • 2831bodily fluid
  • 2820blood
  • 2658vein
  • 882epithelium
  • 651kidney
  • 466brain
  • 462connective tissue
  • 365musculature of body
  • 310lung
  • 283intestine
  • 252heart
  • 252pancreas
  • 244limb
  • 203skin of body
  • 171large intestine
  • 164embryo
  • 146extraembryonic component
  • 134liver
  • 117stomach
  • 108eye
  • 97adipose tissue
  • 89bone element
  • 86mammary gland
  • 84small intestine
  • 79artery
  • 77prostate gland
  • 73placenta
  • 72adrenal gland
  • 64penis
  • 64ureter
  • 62lymph node
  • 50gonad
  • 49thymus
  • 43esophagus
  • 43spinal cord
  • 34spleen
  • 32uterus
  • 26testis
  • 25nerve
  • 24lymphatic vessel
  • 23lymphoid tissue
  • 23ovary
  • 22thyroid gland
  • 19mouth
  • 18skeleton
  • 15bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 384AMP
  • 50ENCODE
  • 15KPMP
  • 4ITG
  • 4community
  • 3LungMap
  • 2T1D
Genome assembly (visualization)
  • 379hg19
  • 128GRCh38
  • 2hg18
month_released!
  • February, 2024
BIOSAMPLE
TYPE

462 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
gene expression
chromatin state
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
pQTL
sQTL
primary cell
fibroblast316412
pericyte cell310101
osteoblast2522132
fibroblast of lung6442
foreskin fibroblast612142
tissue
adipose tissue72836141
subcutaneous adipose tissue22618114
omental fat pad5222223
subcutaneous abdominal adipose tissue51
cartilage tissue122
in vitro differentiated cells
adipocyte4361611
mesenchymal stem cell313211
chondrocyte5
fibroblast11
Adipose SGBS cell line (adipocyte)1
cell line
GM23248211111
fibroblast of cardiac tissue212
HT1080211
foreskin fibroblast111
adipose tissue derived mesenchymal stem cell11
stem cell
mesenchymal stem cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego