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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
241
gene expression
218
accessible chromatin
165
candidate regulatory elements
165
target gene predictions
92
differential activity
84
chromatin state
41
binding sites
32
histone modifications
16
variant allelic effects
4
eQTL
2
caQTL
Date released
241
September, 2022
238
February, 2021
155
September, 2023
130
November, 2021
February, 2024
46
May, 2021
38
March, 2023
32
June, 2020
26
February, 2023
23
August, 2021
22
November, 2022
20
January, 2021
16
May, 2020
15
January, 2020
11
February, 2020
7
April, 2020
7
March, 2020
7
October, 2022
6
August, 2018
5
March, 2024
5
October, 2019
4
August, 2017
2
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
639
bed bed3+
314
tsv
162
bigWig
80
bed bed9
78
txt
4
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1060
Homo sapiens
Biosample type
766
primary cell
211
tissue
63
cell line
20
in vitro differentiated cells
Organ
873
epithelium
651
kidney
465
brain
442
connective tissue
360
musculature of body
310
lung
283
intestine
252
pancreas
250
heart
249
vasculature
244
limb
203
skin of body
190
bodily fluid
189
blood vessel
179
blood
171
large intestine
164
embryo
146
extraembryonic component
127
liver
117
stomach
108
eye
89
bone element
87
adipose tissue
86
mammary gland
84
small intestine
77
prostate gland
75
artery
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
32
uterus
26
testis
25
nerve
23
lymphoid tissue
23
ovary
23
vein
22
thyroid gland
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
746
AMP
155
KPMP
130
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
719
hg19
239
GRCh38
month_released!
February, 2024
BIOSAMPLE
TYPE
1060 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
8
14
7
2
1
2
epithelial cell of proximal tubule
16
1
2
1
1
1
1
hepatocyte
8
3
1
3
1
1
4
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 146 more…
tissue
stomach
1
3
40
21
19
1
1
retina
1
23
6
3
3
1
1
1
1
pigmented layer of retina
19
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
+ See 17 more…
cell line
EndoC_BH1
8
8
1
3
1
pituitary stalk
10
WERI-Rb-1
1
2
1
1
2
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
+ See 10 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 2 more…
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