Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 77accessible chromatin
  • 42target gene predictions
  • 18candidate regulatory elements
  • 9chromatin state
  • 6binding sites
  • 4histone modifications
  • 2variant allelic effects
  • 1eQTL
  • 1gene expression
Date released
  • 52July, 2026
  • 27September, 2022
  • 24February, 2023
  • 22November, 2022
  • 17February, 2021
  • 6June, 2020
  • 4November, 2021
  • 2February, 2020
  • 2January, 2020
  • 2May, 2020
  • 2October, 2022
  • February, 2024
Available data
  • 150bed bed3+
  • 35bigWig
  • 9bed bed9
  • 2tsv
Organism
  • 160Homo sapiens
Collection Tags
  • 46CMDGA
  • 41HDMA
  • 27EpiMap
  • 14ChIP-Atlas
  • 11ENCODE
  • 11ENCODE-rE2G
  • 4AMP
  • 4T2DKP
  • 2DGA
  • 1GTEx
Biosample type
  • 74tissue
  • 68primary cell
  • 12cell line
  • 6in vitro differentiated cells
Organ
  • 3337blood
  • 2886vasculature
  • 2847blood vessel
  • 2825bodily fluid
  • 2659vein
  • 902brain
  • 876epithelium
  • 755kidney
  • 502connective tissue
  • 483heart
  • 439lung
  • 372musculature of body
  • 352intestine
  • 295skin of body
  • 294pancreas
  • 244limb
  • 223large intestine
  • 212liver
  • 174extraembryonic component
  • 164embryo
  • 160eye
  • 142adipose tissue
  • 138stomach
  • 111muscle organ
  • 106bone element
  • 103mammary gland
  • 101adrenal gland
  • 97placenta
  • 97small intestine
  • 93thymus
  • 88artery
  • 86prostate gland
  • 73ureter
  • 64gonad
  • 64penis
  • 63spleen
  • 62lymph node
  • 60__MARKER__
  • 49spinal cord
  • 46esophagus
  • 46thyroid gland
  • 42uterus
  • 32ovary
  • 31testis
  • 25nerve
  • 24skeleton
  • 23lymphoid tissue
  • 21lymphatic vessel
  • 21mouth
  • 15breast
  • 15bronchus
  • 13bone marrow
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 156AMP
  • 4ENCODE
Genome assembly (visualization)
  • 106hg19
  • 68GRCh38
month_released!
  • February, 2024
BIOSAMPLE
TYPE

160 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
gene expression
tissue
retina2366311111
pigmented layer of retina19
eye1442
corneal epithelium1
primary cell
retinal pigment epithelial cell432121
iris pigment epithelial cell1221
fibroblast of the conjunctiva221
amacrine cell12
retinal bipolar neuron21
cell line
WERI-Rb-1132121
fibroblast of the conjunctiva1
retinal cell1
in vitro differentiated cells
retinal pigment epithelial cell6
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego