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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 68candidate regulatory elements
  • 42target gene predictions
  • 36chromatin state
  • 10accessible chromatin
  • 6binding sites
  • 5histone modifications
  • 2eQTL
  • 2gene expression
Date released
  • 98September, 2022
  • 46February, 2021
  • 7June, 2020
  • 6November, 2021
  • 5May, 2021
  • 3August, 2017
  • February, 2024
  • 2January, 2022
  • 2March, 2024
  • 1March, 2020
  • 1October, 2022
Available data
  • 136bed bed3+
  • 33bed bed9
  • 3bigWig
  • 2tsv
Organism
  • 171Homo sapiens
Collection Tags
  • 98EpiMap
  • 37ENCODE
  • 17ChIP-Atlas
  • 6AMP
  • 6DGA
  • 6T2DKP
  • 2GTEx
  • 2T1D
  • 2T2D
  • 2eQTLCatalogue
Biosample type
  • 133tissue
  • 32cell line
  • 6primary cell
Organ
  • 2896vasculature
  • 2833blood vessel
  • 2831bodily fluid
  • 2820blood
  • 2658vein
  • 882epithelium
  • 651kidney
  • 466brain
  • 462connective tissue
  • 365musculature of body
  • 310lung
  • 283intestine
  • 252heart
  • 252pancreas
  • 244limb
  • 203skin of body
  • 171large intestine
  • 164embryo
  • 146extraembryonic component
  • 134liver
  • 117stomach
  • 108eye
  • 97adipose tissue
  • 89bone element
  • 86mammary gland
  • 84small intestine
  • 79artery
  • 77prostate gland
  • 73placenta
  • 72adrenal gland
  • 64penis
  • 64ureter
  • 62lymph node
  • 50gonad
  • 49thymus
  • 43esophagus
  • 43spinal cord
  • 34spleen
  • 32uterus
  • 26testis
  • 25nerve
  • 24lymphatic vessel
  • 23lymphoid tissue
  • 23ovary
  • 22thyroid gland
  • 19mouth
  • 18skeleton
  • 15bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 165AMP
  • 6ENCODE
Genome assembly (visualization)
  • 167hg19
  • 41GRCh38
month_released!
  • February, 2024
BIOSAMPLE
TYPE

171 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine26141311
sigmoid colon10751
transverse colon85411
colonic mucosa4231
mucosa of rectum423
cell line
HT-29221111
SW480211111
HCT-116 cell112
HCT116211
RKO1111
primary cell
colon epithelial cell33
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