Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 146candidate regulatory elements
  • 80target gene predictions
  • 74chromatin state
  • 26accessible chromatin
  • 9eQTL
  • 7binding sites
  • 7histone modifications
  • 6Fine-mapped variants
  • 6caQTL
  • 6gene expression
  • 5variant allelic effects
Date released
  • 204September, 2022
  • 92February, 2021
  • February, 2024
  • 12July, 2025
  • 11November, 2021
  • 9March, 2020
  • 6February, 2020
  • 6June, 2020
  • 6May, 2021
  • 5January, 2020
  • 5May, 2020
  • 3August, 2017
  • 3May, 2022
  • 3October, 2022
  • 2March, 2024
  • 2May, 2019
  • 1August, 2021
  • 1January, 2022
  • 1October, 2019
Available data
  • 275bed bed3+
  • 71bed bed9
  • 21tsv
  • 16bigWig
  • 4bed bed3
  • 4bed narrowPeak
  • 3bigBed bed9
Organism
  • 372Homo sapiens
Collection Tags
  • 204EpiMap
  • 79ENCODE
  • 19ChIP-Atlas
  • 18DGA
  • 18T2DKP
  • 17 T2DKP
  • 13AMP
  • 12GTEx
  • 4T2D
  • 1T1D
  • 1eQTLCatalogue
Biosample type
  • 305tissue
  • 48primary cell
  • 17cell line
  • 2in vitro differentiated cells
Organ
  • 2889vasculature
  • 2826blood vessel
  • 2825bodily fluid
  • 2814blood
  • 2658vein
  • 885epithelium
  • 651kidney
  • 466brain
  • 454connective tissue
  • 372musculature of body
  • 310lung
  • 283intestine
  • 254heart
  • 252pancreas
  • 244limb
  • 203skin of body
  • 171large intestine
  • 164embryo
  • 146extraembryonic component
  • 129liver
  • 117stomach
  • 108eye
  • 89bone element
  • 87adipose tissue
  • 86mammary gland
  • 84small intestine
  • 77prostate gland
  • 75artery
  • 73placenta
  • 72adrenal gland
  • 64penis
  • 64ureter
  • 62lymph node
  • 50gonad
  • 49thymus
  • 43esophagus
  • 43spinal cord
  • 34spleen
  • 32uterus
  • 26testis
  • 25nerve
  • 24lymphatic vessel
  • 23lymphoid tissue
  • 23ovary
  • 22thyroid gland
  • 19mouth
  • 18skeleton
  • 15bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 361AMP
  • 11ENCODE
Genome assembly (visualization)
  • 353hg19
  • 100GRCh38
Encyclopedia version
  • 1Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
  • 1Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
  • 1Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
  • 1Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
month_released!
  • February, 2024
BIOSAMPLE
TYPE

372 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
binding sites
histone modifications
Fine-mapped variants
caQTL
gene expression
variant allelic effects
tissue
muscle of arm33161611
muscle of leg2714152
muscle of back281313
psoas muscle7841
gastrocnemius medialis8541
primary cell
skeletal muscle satellite cell2225111
skeletal muscle cell21111
type I muscle cell121
type II muscle cell121
myotube21
cell line
LHCN-M2211111
A673221
SJCRH302111
in vitro differentiated cells
myotube11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego