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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1707candidate regulatory elements
  • 1183target gene predictions
  • 977histone modifications
  • 864accessible chromatin
  • 720binding sites
  • 615gene expression
  • 182eQTL
  • 167differential activity
  • 85variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2590February, 2021
  • 1678September, 2022
  • 384May, 2021
  • February, 2024
  • 333November, 2021
  • 289June, 2020
  • 286September, 2023
  • 152May, 2020
  • 128August, 2021
  • 128March, 2020
  • 106January, 2022
  • 83January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 15May, 2022
  • 13November, 2019
  • 10October, 2022
  • 9August, 2018
  • 9October, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5665bed bed3+
  • 3509tsv
  • 506bigWig
  • 108txt
  • 5bigBed narrowPeak
  • 3bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 9212Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 1665EpiMap
  • 874ENCODE
  • 530DGA
  • 494AMP
  • 395T1D
  • 392T2DKP
  • 281KPMP
  • 160BLUEPRINT
  • 151GTEx
  • 136 T2DKP
  • 111T2D
  • 101eQTLCatalogue
  • 93CMDGA
  • 55HPAP
  • 38STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4791tissue
  • 2145primary cell
  • 1925cell line
  • 394in vitro differentiated cells
  • 3stem cell
Organ
  • 2859vasculature
  • 2803blood vessel
  • 2785bodily fluid
  • 2776blood
  • 2652vein
  • 824epithelium
  • 572kidney
  • 403connective tissue
  • 388brain
  • 290musculature of body
  • 235lung
  • 235pancreas
  • 223intestine
  • 206heart
  • 194limb
  • 164skin of body
  • 135embryo
  • 134large intestine
  • 116liver
  • 112extraembryonic component
  • 97eye
  • 93stomach
  • 87adipose tissue
  • 73bone element
  • 70artery
  • 68mammary gland
  • 64prostate gland
  • 64small intestine
  • 58adrenal gland
  • 56placenta
  • 52lymph node
  • 52penis
  • 51ureter
  • 41gonad
  • 38thymus
  • 36esophagus
  • 34spinal cord
  • 28spleen
  • 27uterus
  • 22lymphatic vessel
  • 21nerve
  • 21testis
  • 19ovary
  • 18lymphoid tissue
  • 18thyroid gland
  • 15mouth
  • 15skeleton
  • 13bronchus
  • 13pituitary gland
  • 11bone marrow
  • 11breast
  • 8tongue
  • 8urinary bladder
  • 8vagina
  • 5trachea
  • 3nose
  • 1pericardium
Project
  • 8550AMP
  • 333ENCODE
  • 281KPMP
  • 59T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 5665hg19
  • 829GRCh38
  • 4hg18
month_released!
  • February, 2024
software_used.software.name!
  • chromhmm
BIOSAMPLE
TYPE

9260 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart372015132
stomach40211311
kidney29142101711
brain2916321121
primary cell
monocyte286181154121
CD8-positive, alpha-beta T cell753043
common myeloid progenitor, CD34-positive2714
endothelial cell37114282
B cell161062
cell line
A5492119111
EndoC_BH11181831
MCF-796212
breast cancer cell119
K56277111
in vitro differentiated cells
neural progenitor cell5515107
hematopoietic multipotent progenitor cell19101111
adipocyte461311
cardiomyocytes11
embryonic stem cell1161
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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