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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1707candidate regulatory elements
  • 1183target gene predictions
  • 977histone modifications
  • 939chromatin state
  • 858accessible chromatin
  • 811binding sites
  • 609gene expression
  • 182eQTL
  • 84Fine-mapped variants
  • 84variant allelic effects
  • 52differential activity
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2590February, 2021
  • 2511September, 2022
  • 383May, 2021
  • February, 2024
  • 333November, 2021
  • 289June, 2020
  • 176September, 2023
  • 155May, 2020
  • 128August, 2021
  • 128March, 2020
  • 106January, 2022
  • 100October, 2022
  • 89January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 27March, 2025
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5784bed bed3+
  • 3388tsv
  • 869bed bed9
  • 508bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 5bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 10114Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2498EpiMap
  • 1848ChIP-Atlas
  • 965ENCODE
  • 535DGA
  • 495AMP
  • 394T2DKP
  • 389T1D
  • 194BLUEPRINT
  • 171KPMP
  • 151GTEx
  • 130 T2DKP
  • 111T2D
  • 101eQTLCatalogue
  • 92CMDGA
  • 55HPAP
  • 27STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5286tissue
  • 2254primary cell
  • 2178cell line
  • 438in vitro differentiated cells
  • 4stem cell
Organ
  • 2879vasculature
  • 2831bodily fluid
  • 2822blood vessel
  • 2820blood
  • 2658vein
  • 814epithelium
  • 595kidney
  • 466brain
  • 452connective tissue
  • 363musculature of body
  • 310lung
  • 283intestine
  • 252heart
  • 246pancreas
  • 244limb
  • 203skin of body
  • 171large intestine
  • 164embryo
  • 146extraembryonic component
  • 132liver
  • 117stomach
  • 108eye
  • 93adipose tissue
  • 89bone element
  • 86mammary gland
  • 84small intestine
  • 77prostate gland
  • 76artery
  • 73placenta
  • 72adrenal gland
  • 64penis
  • 64ureter
  • 62lymph node
  • 50gonad
  • 49thymus
  • 43esophagus
  • 43spinal cord
  • 34spleen
  • 32uterus
  • 26testis
  • 25nerve
  • 23lymphoid tissue
  • 23ovary
  • 22lymphatic vessel
  • 22thyroid gland
  • 19mouth
  • 18skeleton
  • 15bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 9562AMP
  • 333ENCODE
  • 171KPMP
  • 59T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6688hg19
  • 1693GRCh38
  • 4hg18
month_released!
  • February, 2024
software_used.software.name!
  • deseq2
BIOSAMPLE
TYPE

10162 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
accessible chromatin
binding sites
gene expression
eQTL
Fine-mapped variants
variant allelic effects
differential activity
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart37201215132
stomach4021119311
kidney2914216101711
brain291631821121
primary cell
monocyte286181154121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell7530143
B cell1610862
endothelial cell37114282
cell line
A549211911812
MCF-7962513
K562771712
breast cancer cell119
EndoC_BH11121813
in vitro differentiated cells
neural progenitor cell55154107
hematopoietic multipotent progenitor cell1910110111
adipocyte4616311
embryonic stem cell11561
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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