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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
ChIP-seq
8
snATAC-seq
1
pCHi-C
Assay category
49
DNA binding
8
DNA accessibility
Target of assay
39
transcription factor
8
RNA binding protein
8
chromatin remodeller
5
histone
5
histone modification
5
narrow histone mark
3
control
Date released
27
December, 2018
18
January, 2019
November, 2018
8
January, 2021
4
October, 2019
January, 2018
1
March, 2020
Available data
45
bam
45
fastq
42
bed narrowPeak
42
bigBed narrowPeak
42
bigWig
1
tsv
Organism
58
Homo sapiens
Biosample type
45
cell line
8
primary cell
5
tissue
Organ
939
pancreas
738
liver
682
connective tissue
524
epithelium
489
adipose tissue
393
heart
354
kidney
284
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
95
musculature of body
61
eye
53
blood
53
bodily fluid
43
nerve
36
embryo
22
vein
20
lung
18
ureter
16
skeleton
16
spleen
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
50
AMP
8
T1D
Genome assembly (visualization)
42
GRCh38
42
hg19
Lab
50
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
month_released!
January, 2018
November, 2018
BIOSAMPLE
ASSAY
58 results
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Clear Filters
ChIP-seq
snATAC-seq
pCHi-C
cell line
GM12878
45
primary cell
peripheral blood mononuclear cell
8
tissue
islet of Langerhans
4
ovary
1
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