Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 42ChIP-seq
  • 8snATAC-seq
  • 1ATAC-seq
Assay category
  • 42DNA binding
  • 9DNA accessibility
Target of assay
  • 37transcription factor
  • 4RNA binding protein
  • 4chromatin remodeller
  • 3control
Date released
  • 27December, 2018
  • January, 2019
  • 15November, 2018
  • 8January, 2021
  • 1January, 2018
Available data
  • 42bam
  • 42fastq
  • 40bigWig
  • 39bed narrowPeak
  • 39bigBed narrowPeak
Organism
  • 51Homo sapiens
Biosample type
  • 43cell line
  • 8primary cell
Organ
  • 946pancreas
  • 786liver
  • 684connective tissue
  • 524epithelium
  • 491adipose tissue
  • 393heart
  • 354kidney
  • 286brain
  • 236vasculature
  • 230blood vessel
  • 159bone element
  • 141artery
  • 122limb
  • 96musculature of body
  • 61eye
  • 51blood
  • 51bodily fluid
  • 43nerve
  • 37embryo
  • 22vein
  • 20lung
  • 18spleen
  • 18ureter
  • 16skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pericardium
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 43AMP
  • 8T1D
Genome assembly (visualization)
  • 40hg19
  • 39GRCh38
Lab
  • 43AMP-T2D consortium
  • 8Kyle Gaulton, UCSD
Audit category:
  • 1inconsistent control
month_released!
  • January, 2019
BIOSAMPLE
ASSAY

51 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878421
primary cell
peripheral blood mononuclear cell8
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego