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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
2
ATAC-seq
2
WGBS
1
DNase-seq
1
pCHi-C
Assay category
14
DNA binding
3
DNA accessibility
2
DNA methylation
Target of assay
7
control
6
transcription factor
3
other context
3
other post-translational modification
1
histone
1
histone modification
1
narrow histone mark
Date released
9
November, 2018
7
December, 2018
January, 2019
2
October, 2019
1
March, 2020
1
October, 2017
Available data
18
bam
17
fastq
11
bigWig
9
bed narrowPeak
7
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tagAlign
1
tsv
Organism
20
Homo sapiens
Biosample type
20
tissue
Organ
946
pancreas
786
liver
684
connective tissue
524
epithelium
491
adipose tissue
393
heart
354
kidney
286
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
61
eye
blood
bodily fluid
43
nerve
37
embryo
22
vein
20
lung
18
spleen
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
20
AMP
Genome assembly (visualization)
11
GRCh38
9
hg19
Lab
20
AMP-T2D consortium
month_released!
January, 2019
organ_slims!
blood
bodily fluid
BIOSAMPLE
ASSAY
20 results
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ChIP-seq
ATAC-seq
WGBS
DNase-seq
pCHi-C
tissue
spleen
13
1
2
1
1
islet of Langerhans
1
pituitary gland
1
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