Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
33
candidate regulatory elements
20
target gene predictions
16
chromatin state
7
accessible chromatin
5
binding sites
5
eQTL
3
Fine-mapped variants
2
gene expression
1
histone modifications
Date released
48
September, 2022
21
February, 2021
6
June, 2020
4
January, 2022
4
March, 2020
2
March, 2024
2
May, 2021
2
November, 2021
2
October, 2022
1
February, 2020
January, 2020
Available data
66
bed bed3+
16
bed bed9
6
tsv
1
bigWig
Organism
92
Homo sapiens
Biosample type
74
tissue
10
cell line
8
primary cell
Organ
915
epithelium
638
kidney
448
connective tissue
437
brain
370
musculature of body
311
lung
289
intestine
253
pancreas
250
vasculature
243
heart
237
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
87
bone element
87
mammary gland
85
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
lymphatic vessel
vein
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
90
AMP
2
ENCODE
Genome assembly (visualization)
86
hg19
26
GRCh38
month_released!
January, 2020
January, 2021
organ_slims!
vein
BIOSAMPLE
TYPE
92 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
eQTL
Fine-mapped variants
gene expression
histone modifications
tissue
spinal cord
14
8
7
1
1
ovary
8
6
4
1
1
1
testis
7
3
3
1
1
1
1
1
C1 segment of cervical spinal cord
1
3
cell line
NT2-D1 cell
1
1
1
1
2
spinal cord
1
2
NT2/D1
1
primary cell
astrocyte of the spinal cord
2
1
1
luteal cell
1
1
Leydig cell
1
somatic gonadal cell
1
Download