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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
256
gene expression
211
candidate regulatory elements
168
target gene predictions
141
accessible chromatin
111
chromatin state
94
binding sites
92
differential activity
57
histone modifications
41
variant allelic effects
7
eQTL
2
caQTL
Date released
315
September, 2022
312
February, 2021
155
September, 2023
November, 2021
107
February, 2024
44
June, 2020
43
May, 2021
38
March, 2023
26
October, 2022
25
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
January, 2020
12
February, 2023
9
February, 2020
8
August, 2017
7
April, 2020
7
March, 2020
6
August, 2018
5
March, 2024
5
October, 2019
2
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
718
bed bed3+
327
tsv
103
bed bed9
86
bigWig
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1180
Homo sapiens
Biosample type
688
primary cell
268
cell line
198
tissue
26
in vitro differentiated cells
Organ
808
epithelium
635
kidney
437
brain
400
connective tissue
359
musculature of body
302
lung
270
intestine
255
pancreas
244
vasculature
237
limb
233
heart
218
bodily fluid
213
embryo
207
blood
194
skin of body
190
blood vessel
168
large intestine
148
liver
143
extraembryonic component
110
stomach
103
eye
88
bone element
85
adipose tissue
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
artery
71
placenta
64
penis
63
adrenal gland
62
lymph node
61
ureter
48
gonad
48
thymus
42
spinal cord
41
esophagus
34
spleen
26
testis
24
lymphoid tissue
24
nerve
21
ovary
21
thyroid gland
21
vein
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
996
AMP
155
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
826
hg19
180
GRCh38
month_released!
January, 2020
November, 2021
BIOSAMPLE
TYPE
1180 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
binding sites
differential activity
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
hepatocyte
13
1
2
6
1
1
4
2
endothelial cell
9
1
5
2
1
2
1
2
epithelial cell of proximal tubule
16
2
1
1
1
1
glomerular endothelial cell
14
2
1
1
1
1
foreskin keratinocyte
11
4
4
+ See 124 more…
cell line
K562
7
23
1
7
2
1
EndoC_BH1
8
1
8
3
1
GM12878
2
8
1
2
2
1
GM06990
2
1
1
1
2
1
GM19240
1
2
1
1
2
1
+ See 41 more…
tissue
large intestine
27
14
1
13
1
sigmoid colon
10
7
1
5
pigmented layer of retina
20
transverse colon
8
5
1
4
1
breast epithelium
5
3
1
2
+ See 29 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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