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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
223
gene expression
151
target gene predictions
139
candidate regulatory elements
134
accessible chromatin
84
binding sites
74
chromatin state
65
differential activity
47
histone modifications
33
variant allelic effects
5
eQTL
2
caQTL
Date released
253
February, 2021
210
September, 2022
155
September, 2023
109
November, 2021
82
February, 2024
34
June, 2020
25
August, 2021
24
October, 2022
January, 2020
13
May, 2020
13
May, 2021
9
February, 2020
7
April, 2020
5
August, 2017
5
March, 2020
4
March, 2023
3
March, 2024
2
January, 2021
2
May, 2022
1
February, 2023
1
July, 2020
Available data
593
bed bed3+
275
tsv
103
bigWig
78
txt
69
bed bed9
3
csv
1
bigBed narrowPeak
Organism
957
Homo sapiens
Biosample type
690
primary cell
214
cell line
36
tissue
17
in vitro differentiated cells
Organ
935
epithelium
638
kidney
450
connective tissue
437
brain
370
musculature of body
311
lung
289
intestine
pancreas
250
vasculature
243
heart
237
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
eye
89
bone element
87
mammary gland
85
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
684
AMP
155
KPMP
109
ENCODE
7
LungMap
2
T1D
Genome assembly (visualization)
665
hg19
238
GRCh38
month_released!
January, 2020
organ_slims!
eye
pancreas
BIOSAMPLE
TYPE
957 results
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Clear Filters
gene expression
target gene predictions
candidate regulatory elements
accessible chromatin
binding sites
chromatin state
differential activity
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
7
15
2
1
2
1
2
hepatocyte
13
3
1
7
1
1
4
2
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
1
2
1
1
1
foreskin keratinocyte
4
11
4
+ See 134 more…
cell line
K562
23
7
1
2
7
1
GM12878
8
2
1
2
2
1
GM06990
1
2
1
2
1
1
GM19240
2
1
1
2
1
1
HAP-1
2
2
1
1
1
1
+ See 31 more…
tissue
breast epithelium
3
5
1
2
esophagus squamous epithelium
2
6
1
2
blood
2
kidney epithelium
1
1
breast - mammary tissue
1
+ See 9 more…
in vitro differentiated cells
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 2 more…
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