Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
224
gene expression
152
accessible chromatin
102
candidate regulatory elements
99
target gene predictions
65
differential activity
53
chromatin state
39
binding sites
34
variant allelic effects
24
histone modifications
5
eQTL
3
Fine-mapped variants
2
caQTL
Date released
187
February, 2021
155
September, 2023
150
September, 2022
110
November, 2021
55
February, 2024
24
June, 2020
23
August, 2021
15
May, 2020
15
November, 2022
January, 2020
12
February, 2020
11
February, 2023
9
May, 2021
8
March, 2020
7
April, 2020
5
October, 2022
4
March, 2023
3
August, 2017
2
January, 2021
2
March, 2024
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
Available data
453
bed bed3+
280
tsv
120
bigWig
78
txt
50
bed bed9
3
csv
1
bigBed bed9
1
bigBed narrowPeak
Organism
802
Homo sapiens
Biosample type
685
primary cell
78
tissue
23
in vitro differentiated cells
16
cell line
Organ
935
epithelium
638
kidney
450
connective tissue
brain
370
musculature of body
311
lung
289
intestine
pancreas
250
vasculature
243
heart
237
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
89
bone element
87
mammary gland
85
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
528
AMP
155
KPMP
110
ENCODE
7
LungMap
2
T1D
Genome assembly (visualization)
508
hg19
198
GRCh38
month_released!
January, 2020
organ_slims!
brain
pancreas
BIOSAMPLE
TYPE
802 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
7
1
3
1
1
2
4
epithelial cell of proximal tubule
16
2
1
1
1
1
glomerular endothelial cell
14
1
2
1
1
1
foreskin keratinocyte
11
4
4
+ See 132 more…
tissue
tibial nerve
2
2
6
3
4
2
2
3
pigmented layer of retina
20
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
kidney epithelium
1
1
+ See 10 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 3 more…
cell line
keratinocyte
3
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
dermis lymphatic vessel endothelial cell
1
1
vein endothelial cell
1
1
+ See 2 more…
See all biosamples
Download