Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
81
candidate regulatory elements
80
target gene predictions
74
accessible chromatin
49
gene expression
46
chromatin state
33
differential activity
18
eQTL
17
binding sites
15
histone modifications
12
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
128
September, 2022
79
February, 2021
47
March, 2023
37
May, 2021
28
November, 2021
26
February, 2024
20
January, 2021
10
June, 2020
9
March, 2020
8
August, 2021
7
August, 2018
7
January, 2022
6
May, 2020
6
October, 2019
4
August, 2017
January, 2020
2
February, 2020
2
March, 2024
2
November, 2019
2
October, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
284
bed bed3+
77
tsv
60
bigWig
41
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
434
Homo sapiens
Biosample type
191
primary cell
133
tissue
101
cell line
9
in vitro differentiated cells
Organ
945
epithelium
638
kidney
458
connective tissue
437
brain
370
musculature of body
311
lung
289
intestine
273
pancreas
253
vasculature
245
heart
237
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
107
eye
89
bone element
87
mammary gland
85
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
artery
penis
62
lymph node
61
ureter
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphatic vessel
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
384
AMP
28
ENCODE
20
T1D
2
community
Genome assembly (visualization)
339
hg19
100
GRCh38
month_released!
January, 2020
organ_slims!
artery
penis
BIOSAMPLE
TYPE
434 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
gene expression
chromatin state
differential activity
eQTL
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
keratinocyte
3
5
2
3
1
2
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
+ See 23 more…
tissue
islet of Langerhans
6
11
3
13
2
1
1
2
2
2
body of pancreas
8
5
1
4
1
1
3
pancreas
5
5
3
3
1
1
1
1
endocrine pancreas
7
4
4
lower leg skin
6
2
2
+ See 12 more…
cell line
EndoC_BH1
1
8
8
3
1
GM23248
2
1
1
1
1
1
Panc1
2
2
1
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
+ See 20 more…
in vitro differentiated cells
iPS DF 4.7 Cell Line
1
1
1
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
See all biosamples
Download