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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
29
ATAC-seq
24
total RNA-seq
4
pCHi-C
2
DNase-seq
1
RRBS
Assay category
37
DNA binding
31
DNA accessibility
24
Transcription
1
DNA methylation
Target of assay
26
histone
26
histone modification
16
broad histone mark
11
control
10
narrow histone mark
Date released
63
October, 2019
31
February, 2023
June, 2019
2
February, 2020
1
July, 2019
Available data
54
bed narrowPeak
42
bam
31
bigWig
26
bigBed narrowPeak
10
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
97
Homo sapiens
Biosample type
96
tissue
1
primary cell
Organ
932
pancreas
789
liver
666
connective tissue
499
epithelium
490
adipose tissue
337
heart
268
kidney
228
brain
179
vasculature
175
blood vessel
159
bone element
134
artery
83
limb
61
blood
61
bodily fluid
54
eye
46
musculature of body
43
nerve
37
embryo
25
spleen
22
vein
20
lung
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
97
AMP
Genome assembly (visualization)
59
hg19
31
GRCh38
Lab
97
AMP-T2D consortium
month_released!
January, 2021
June, 2019
May, 2019
BIOSAMPLE
ASSAY
97 results
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ChIP-seq
ATAC-seq
total RNA-seq
pCHi-C
DNase-seq
RRBS
tissue
tibial nerve
35
1
5
2
islet of Langerhans
2
1
14
4
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
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