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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
77
candidate regulatory elements
48
target gene predictions
40
chromatin state
11
accessible chromatin
6
binding sites
5
histone modifications
3
eQTL
3
gene expression
Date released
110
September, 2022
50
February, 2021
8
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
3
January, 2022
3
March, 2024
1
March, 2020
1
October, 2022
Available data
150
bed bed3+
37
bed bed9
3
bigWig
3
tsv
Organism
193
Homo sapiens
Biosample type
145
tissue
38
cell line
10
primary cell
Organ
939
epithelium
652
kidney
466
brain
466
connective tissue
375
musculature of body
311
lung
289
intestine
269
vasculature
257
heart
257
pancreas
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
87
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
187
AMP
6
ENCODE
Genome assembly (visualization)
187
hg19
48
GRCh38
month_released!
January, 2021
organ_slims!
thymus
BIOSAMPLE
TYPE
193 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 9 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
ACC112
2
1
1
HCT-116 cell
1
1
2
+ See 4 more…
primary cell
colon epithelial cell
3
3
fibroblast of gingiva
2
1
1
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