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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
80
accessible chromatin
72
gene expression
65
target gene predictions
49
candidate regulatory elements
37
differential activity
34
chromatin state
20
histone modifications
18
binding sites
18
eQTL
15
variant allelic effects
8
Fine-mapped variants
2
sQTL
2
variant to gene
1
caQTL
Date released
90
September, 2022
57
February, 2021
54
February, 2024
51
March, 2023
36
May, 2021
23
November, 2021
20
January, 2021
19
March, 2020
18
August, 2021
June, 2020
9
May, 2020
7
August, 2018
7
January, 2020
6
August, 2017
6
October, 2019
January, 2022
4
February, 2020
3
November, 2019
2
May, 2022
2
May, 2024
1
April, 2019
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
October, 2022
1
September, 2018
Available data
253
bed bed3+
104
tsv
80
bigWig
27
bed bed9
14
bigBed narrowPeak
6
csv
4
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
421
Homo sapiens
Biosample type
188
primary cell
163
tissue
60
cell line
10
in vitro differentiated cells
Organ
934
epithelium
636
kidney
442
connective tissue
427
brain
368
musculature of body
304
lung
276
intestine
269
pancreas
260
vasculature
249
heart
236
limb
206
bodily fluid
205
embryo
197
blood vessel
195
blood
193
skin of body
165
large intestine
152
liver
139
extraembryonic component
115
stomach
103
eye
85
adipose tissue
84
bone element
83
mammary gland
82
small intestine
80
uterus
72
prostate gland
71
adrenal gland
70
placenta
69
artery
63
ureter
61
penis
54
lymph node
48
thymus
43
gonad
40
esophagus
40
spinal cord
32
spleen
23
lymphatic vessel
23
nerve
22
lymphoid tissue
22
testis
22
vein
21
ovary
21
thyroid gland
18
skeleton
17
mouth
15
bronchus
13
bone marrow
12
pituitary gland
11
breast
9
tongue
9
urinary bladder
9
vagina
4
trachea
3
nose
1
pericardium
Project
376
AMP
23
ENCODE
20
T1D
2
community
Genome assembly (visualization)
303
hg19
118
GRCh38
2
hg18
month_released!
January, 2022
June, 2020
BIOSAMPLE
TYPE
421 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
differential activity
chromatin state
histone modifications
binding sites
eQTL
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
caQTL
primary cell
hepatocyte
7
13
3
2
1
4
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic ductal cell
5
3
3
3
2
1
1
pancreatic alpha cell
7
3
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 17 more…
tissue
liver
3
1
10
13
1
9
2
1
6
1
islet of Langerhans
5
11
1
3
1
2
10
1
2
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
3
5
5
3
1
1
1
endocrine pancreas
4
7
4
+ See 8 more…
cell line
EndoC_BH1
8
8
1
3
1
HepG2
1
3
2
2
5
3
HuH-7
1
1
1
1
1
Panc1
2
2
1
8988T
1
1
1
+ See 5 more…
in vitro differentiated cells
hepatocyte
1
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
See all biosamples
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