Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
92
candidate regulatory elements
68
gene expression
65
target gene predictions
62
accessible chromatin
60
chromatin state
32
binding sites
25
histone modifications
22
variant allelic effects
21
differential activity
20
eQTL
18
Fine-mapped variants
4
caQTL
Date released
145
September, 2022
102
February, 2021
35
September, 2023
34
February, 2024
30
March, 2020
23
January, 2020
21
May, 2020
17
August, 2021
13
June, 2020
12
February, 2020
9
May, 2021
9
November, 2021
January, 2022
6
August, 2017
5
October, 2022
4
February, 2023
4
March, 2023
4
November, 2019
3
April, 2020
3
September, 2018
2
May, 2022
2
October, 2019
1
January, 2018
1
July, 2020
1
March, 2024
1
May, 2019
1
November, 2022
Available data
306
bed bed3+
106
tsv
54
bed bed9
53
bigWig
10
bigBed bed9
3
csv
2
txt
1
bam
Organism
489
Homo sapiens
Biosample type
219
tissue
218
primary cell
42
cell line
10
in vitro differentiated cells
Organ
949
epithelium
651
kidney
454
connective tissue
448
brain
374
musculature of body
310
lung
286
intestine
273
pancreas
263
vasculature
252
heart
242
limb
218
bodily fluid
215
embryo
207
blood
201
blood vessel
201
skin of body
172
large intestine
155
liver
145
extraembryonic component
118
stomach
109
eye
89
bone element
87
mammary gland
86
adipose tissue
83
small intestine
82
uterus
77
prostate gland
72
adrenal gland
72
artery
72
placenta
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
42
spinal cord
33
spleen
24
lymphoid tissue
24
nerve
24
testis
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
442
AMP
35
KPMP
9
ENCODE
3
LungMap
Genome assembly (visualization)
390
hg19
147
GRCh38
4
hg18
month_released!
January, 2022
BIOSAMPLE
TYPE
489 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
gene expression
target gene predictions
accessible chromatin
chromatin state
binding sites
histone modifications
variant allelic effects
differential activity
eQTL
Fine-mapped variants
caQTL
tissue
liver
13
1
10
4
9
1
2
1
6
1
adipose tissue
7
3
8
2
6
1
1
3
coronary artery
3
1
3
3
3
2
1
3
1
subcutaneous adipose tissue
2
5
2
1
1
1
5
3
omental fat pad
5
2
2
2
2
2
3
+ See 13 more…
primary cell
hepatocyte
1
13
3
8
1
1
4
2
endothelial cell of umbilical vein
6
4
2
5
2
1
endothelial cell of hepatic sinusoid
4
6
6
dermis blood vessel endothelial cell
6
2
2
hepatic stellate cell
1
1
1
3
1
1
1
+ See 32 more…
cell line
HepG2
2
3
2
2
3
5
HuH-7
1
1
1
1
1
1
smooth muscle cell of the coronary artery
1
1
1
1
HuH-7.5
1
1
1
choroid plexus epithelial cell
1
1
1
+ See 5 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
dermis microvascular lymphatic vessel endothelial cell
1
1
white adipose cell
1
See all biosamples
Download