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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
272
gene expression
249
accessible chromatin
217
candidate regulatory elements
196
target gene predictions
123
chromatin state
92
differential activity
75
histone modifications
57
binding sites
56
variant allelic effects
36
Fine-mapped variants
15
eQTL
2
caQTL
Date released
325
September, 2022
302
February, 2021
158
September, 2023
126
November, 2021
77
February, 2024
45
June, 2020
45
May, 2021
44
March, 2020
41
January, 2020
38
March, 2023
32
May, 2020
27
February, 2020
23
August, 2021
20
January, 2021
January, 2022
15
November, 2022
12
February, 2023
11
October, 2022
10
May, 2024
9
August, 2017
7
April, 2020
6
August, 2018
5
October, 2019
4
May, 2019
3
March, 2024
2
May, 2022
2
November, 2019
1
July, 2020
Available data
850
bed bed3+
391
tsv
193
bigWig
114
bed bed9
78
txt
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1389
Homo sapiens
Biosample type
850
primary cell
393
tissue
117
cell line
29
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
651
kidney
462
connective tissue
448
brain
374
musculature of body
310
lung
286
intestine
273
pancreas
266
vasculature
254
heart
242
limb
218
bodily fluid
215
embryo
207
blood
201
blood vessel
201
skin of body
172
large intestine
157
liver
145
extraembryonic component
118
stomach
109
eye
89
bone element
87
mammary gland
86
adipose tissue
83
small intestine
82
uterus
77
prostate gland
72
adrenal gland
72
artery
placenta
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
42
spinal cord
33
spleen
24
lymphatic vessel
24
lymphoid tissue
24
nerve
24
testis
23
vein
22
ovary
22
thyroid gland
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
vagina
5
trachea
4
nose
1
pericardium
Project
1080
AMP
155
KPMP
126
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
1015
hg19
373
GRCh38
month_released!
January, 2022
organ_slims!
placenta
vagina
BIOSAMPLE
TYPE
1390 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
3
7
1
2
2
1
2
hepatocyte
13
8
2
3
1
4
1
2
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 151 more…
tissue
brain
1
2
29
16
18
3
1
1
caudate nucleus
1
2
5
3
4
1
1
3
1
pigmented layer of retina
20
substantia nigra
1
5
2
3
1
3
1
cerebellum
2
1
3
2
2
1
3
1
+ See 75 more…
cell line
EndoC_BH1
8
8
1
3
1
SK-N-DZ
1
4
2
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
1
2
1
1
1
2
+ See 19 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 7 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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