Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 89accessible chromatin
  • 83target gene predictions
  • 80candidate regulatory elements
  • 63differential activity
  • 49gene expression
  • 48chromatin state
  • 31binding sites
  • 25histone modifications
  • 16variant allelic effects
  • 15eQTL
  • 6Fine-mapped variants
  • 3caQTL
  • 2pQTL
  • 2sQTL
Date released
  • 120September, 2022
  • 109February, 2021
  • 51May, 2026
  • 50November, 2021
  • 20June, 2020
  • 17September, 2023
  • 16February, 2024
  • 16May, 2021
  • 12October, 2022
  • 11August, 2021
  • 10January, 2020
  • 10May, 2020
  • 9February, 2020
  • 9March, 2020
  • 7August, 2017
  • 7March, 2023
  • 7November, 2022
  • January, 2022
  • 5July, 2026
  • 3April, 2020
  • 3May, 2022
  • 3November, 2020
  • 2January, 2021
  • 2January, 2025
  • 2July, 2025
  • 2May, 2024
  • 2October, 2019
  • 2September, 2018
  • 1August, 2018
  • 1February, 2023
  • 1January, 2018
  • 1June, 2021
Available data
  • 338bed bed3+
  • 64tsv
  • 55bigWig
  • 41bed bed9
  • 7txt
  • 2bigBed bed9
  • 2csv
  • 1bed bed3
  • 1bed narrowPeak
  • 1bigBed narrowPeak
Organism
  • 512Homo sapiens
Collection Tags
  • 120EpiMap
  • 70DGA
  • 68AMP
  • 67T2DKP
  • 65ChIP-Atlas
  • 60ENCODE
  • 51pyxis
  • 39 T2DKP
  • 15KPMP
  • 10CMDGA
  • 10GTEx
  • 9HPAP
  • 5ENCODE-rE2G
  • 3T1D
  • 1BLUEPRINT
  • 1T2D
Biosample type
  • 335primary cell
  • 93tissue
  • 52in vitro differentiated cells
  • 31cell line
  • 1stem cell
Organ
  • 3365blood
  • 2899vasculature
  • 2858blood vessel
  • 2853bodily fluid
  • 2659vein
  • 952epithelium
  • 885brain
  • 755kidney
  • 512connective tissue
  • 485heart
  • 439lung
  • 385musculature of body
  • 355intestine
  • 315pancreas
  • 293skin of body
  • 242limb
  • 239liver
  • 224large intestine
  • 215embryo
  • 173extraembryonic component
  • 161eye
  • 139adipose tissue
  • 139stomach
  • 111muscle organ
  • 104bone element
  • 104mammary gland
  • 101adrenal gland
  • 96placenta
  • 96small intestine
  • 93thymus
  • 92uterus
  • 86prostate gland
  • 85artery
  • 73ureter
  • 64penis
  • 62lymph node
  • 62spleen
  • 61gonad
  • 60__MARKER__
  • 48spinal cord
  • 46thyroid gland
  • 45esophagus
  • 31ovary
  • 29testis
  • 24lymphoid tissue
  • 24nerve
  • 22skeleton
  • 21lymphatic vessel
  • 20mouth
  • 16bronchus
  • 14breast
  • 13bone marrow
  • 13urinary bladder
  • 12pituitary gland
  • 12tongue
  • 11vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 434AMP
  • 50ENCODE
  • 15KPMP
  • 4ITG
  • 4community
  • 3LungMap
  • 2T1D
Genome assembly (visualization)
  • 387hg19
  • 122GRCh38
  • 2hg18
Encyclopedia version
  • 1Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
month_released!
  • January, 2022
BIOSAMPLE
TYPE

512 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
gene expression
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
pQTL
sQTL
primary cell
fibroblast16416
pericyte cell101011
osteoblast5222132
fibroblast of lung4642
foreskin fibroblast126142
tissue
adipose tissue28736113
omental fat pad2452223
subcutaneous adipose tissue2251153
subcutaneous abdominal adipose tissue51
cartilage tissue122
in vitro differentiated cells
adipocyte4741611
mesenchymal stem cell143211
chondrocyte5
fibroblast11
Adipose SGBS cell line (adipocyte)1
cell line
GM23248112111
fibroblast of cardiac tissue212
HT1080121
foreskin fibroblast111
adipose tissue derived mesenchymal stem cell11
stem cell
mesenchymal stem cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego