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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
143
candidate regulatory elements
114
target gene predictions
109
accessible chromatin
84
chromatin state
77
gene expression
37
differential activity
23
variant allelic effects
22
histone modifications
21
eQTL
20
binding sites
17
Fine-mapped variants
2
sQTL
2
variant to gene
1
caQTL
Date released
228
September, 2022
115
February, 2021
54
February, 2024
51
March, 2023
39
May, 2021
28
March, 2020
23
November, 2021
20
January, 2021
19
May, 2020
18
August, 2021
15
June, 2020
14
January, 2020
10
February, 2020
7
August, 2018
January, 2022
6
August, 2017
6
October, 2019
5
November, 2019
2
May, 2019
2
May, 2022
2
May, 2024
1
April, 2019
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
March, 2024
1
October, 2022
1
September, 2018
Available data
437
bed bed3+
121
tsv
94
bigWig
77
bed bed9
14
bigBed narrowPeak
7
bigBed bed9
6
csv
4
bam
3
bed gappedPeak
3
xls
Organism
672
Homo sapiens
Biosample type
401
tissue
192
primary cell
69
cell line
10
in vitro differentiated cells
Organ
959
epithelium
651
kidney
462
connective tissue
448
brain
374
musculature of body
310
lung
286
intestine
273
pancreas
266
vasculature
254
heart
242
limb
218
bodily fluid
215
embryo
207
blood
201
blood vessel
201
skin of body
172
large intestine
157
liver
145
extraembryonic component
118
stomach
109
eye
89
bone element
87
mammary gland
86
adipose tissue
83
small intestine
82
uterus
77
prostate gland
72
adrenal gland
72
artery
72
placenta
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
42
spinal cord
33
spleen
24
lymphatic vessel
24
lymphoid tissue
24
nerve
24
testis
23
vein
22
ovary
22
thyroid gland
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
627
AMP
23
ENCODE
20
T1D
2
community
Genome assembly (visualization)
549
hg19
194
GRCh38
2
hg18
month_released!
January, 2022
BIOSAMPLE
TYPE
672 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
differential activity
variant allelic effects
histone modifications
eQTL
binding sites
Fine-mapped variants
sQTL
variant to gene
caQTL
tissue
muscle of arm
33
16
1
16
1
muscle of leg
27
14
2
15
liver
13
10
4
9
1
1
2
6
1
1
islet of Langerhans
1
6
3
11
1
1
10
2
2
2
2
body of pancreas
8
5
4
2
1
1
3
+ See 31 more…
primary cell
hepatocyte
2
3
8
1
13
2
4
1
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 18 more…
cell line
EndoC_BH1
1
8
8
3
1
HepG2
2
3
2
2
5
3
GM23248
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
Panc1
2
2
1
+ See 6 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
See all biosamples
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