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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
ChIP-seq
Assay category
68
DNA binding
Target of assay
68
histone
68
histone modification
38
narrow histone mark
30
broad histone mark
25
control
7
transcription factor
6
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
21
September, 2018
October, 2019
14
August, 2017
14
December, 2017
10
November, 2019
3
August, 2021
2
May, 2021
2
November, 2017
1
June, 2019
1
March, 2020
Available data
68
bam
68
bed narrowPeak
68
bigWig
51
fastq
15
bigBed narrowPeak
4
tagAlign
3
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
68
Homo sapiens
Biosample type
41
primary cell
15
in vitro differentiated cells
12
cell line
Organ
144
pancreas
110
brain
98
liver
92
heart
77
connective tissue
72
epithelium
38
vasculature
37
blood vessel
33
musculature of body
32
adipose tissue
kidney
12
embryo
6
limb
6
spleen
2
artery
1
blood
1
bodily fluid
1
eye
Project
66
AMP
2
T1D
Genome assembly (visualization)
68
GRCh38
68
hg19
Lab
68
AMP-T2D consortium
Audit category:
14
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
5
inconsistent control read length
month_released!
July, 2019
October, 2019
organ_slims!
kidney
BIOSAMPLE
ASSAY
68 results
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Clear Filters
ChIP-seq
primary cell
pancreatic ductal cell
13
pancreatic acinar cell
8
pancreatic alpha cell
7
pancreatic beta cell
7
hepatocyte
3
+ See 3 more…
in vitro differentiated cells
hepatocyte
12
Hepatic endoderm
2
pancreatic PP cell
1
cell line
EndoC_BH1
12
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