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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
20
total RNA-seq
5
ChIP-seq
4
DNase-seq
4
pCHi-C
Assay category
32
DNA accessibility
20
Transcription
5
DNA binding
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
31
February, 2023
21
October, 2019
7
June, 2019
2
February, 2020
July, 2019
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
6
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
61
Homo sapiens
Biosample type
57
tissue
4
primary cell
Organ
862
pancreas
739
liver
622
connective tissue
467
epithelium
459
adipose tissue
328
kidney
311
heart
198
brain
179
vasculature
174
blood vessel
159
bone element
124
artery
83
limb
69
blood
69
bodily fluid
musculature of body
60
eye
33
embryo
27
nerve
21
spleen
20
lung
18
ureter
16
skeleton
13
vein
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
61
AMP
Genome assembly (visualization)
33
hg19
6
GRCh38
Lab
61
AMP-T2D consortium
month_released!
July, 2019
organ_slims!
musculature of body
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
61 results
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ATAC-seq
total RNA-seq
ChIP-seq
DNase-seq
pCHi-C
tissue
islet of Langerhans
1
14
2
4
retina
15
3
3
pigmented layer of retina
12
2
C1 segment of cervical spinal cord
1
primary cell
retinal pigment epithelial cell
3
1
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