Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
172
candidate regulatory elements
144
target gene predictions
132
accessible chromatin
116
chromatin state
92
gene expression
60
histone modifications
50
Fine-mapped variants
50
eQTL
45
differential activity
37
binding sites
36
variant allelic effects
3
caQTL
2
sQTL
2
variant to gene
Date released
281
September, 2022
176
February, 2021
59
March, 2020
51
March, 2023
47
May, 2021
43
January, 2020
41
February, 2024
35
May, 2020
29
June, 2020
25
February, 2020
25
January, 2022
23
September, 2023
21
November, 2021
20
January, 2021
10
August, 2017
9
August, 2021
8
October, 2019
8
October, 2022
7
August, 2018
6
November, 2019
5
February, 2023
5
May, 2019
2
April, 2020
2
March, 2024
1
April, 2019
1
January, 2018
1
June, 2021
Available data
586
bed bed3+
190
tsv
105
bed bed9
100
bigWig
16
bigBed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
940
Homo sapiens
Biosample type
547
tissue
269
primary cell
117
cell line
7
in vitro differentiated cells
1
stem cell
Organ
948
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
876
AMP
21
ENCODE
20
KPMP
20
T1D
2
LungMap
2
community
Genome assembly (visualization)
762
hg19
285
GRCh38
month_released!
July, 2020
BIOSAMPLE
TYPE
941 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
histone modifications
Fine-mapped variants
eQTL
differential activity
binding sites
variant allelic effects
caQTL
sQTL
variant to gene
tissue
brain
29
16
2
18
1
3
2
1
1
islet of Langerhans
1
6
3
11
1
2
13
2
1
2
2
body of pancreas
8
5
4
2
3
1
1
caudate nucleus
5
3
2
4
1
1
3
2
1
pancreas
5
5
5
3
1
1
1
1
+ See 76 more…
primary cell
endothelial cell of umbilical vein
6
4
2
5
2
1
pancreatic ductal cell
3
6
3
2
3
1
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 39 more…
cell line
EndoC_BH1
1
8
8
3
1
SK-N-DZ
4
2
1
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
+ See 17 more…
in vitro differentiated cells
pancreatic ductal cell
3
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download